Protein Info for MPMX20_04747 in Enterobacter sp. TBS_079

Annotation: Protein UmuC

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 219 signal peptide" amino acids 1 to 15 (15 residues), see Phobius details PF11799: IMS_C" amino acids 49 to 165 (117 residues), 95 bits, see alignment E=3.9e-31 PF13438: DUF4113" amino acids 177 to 214 (38 residues), 45.6 bits, see alignment 6e-16

Best Hits

Predicted SEED Role

"Error-prone, lesion bypass DNA polymerase V (UmuC)"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (219 amino acids)

>MPMX20_04747 Protein UmuC (Enterobacter sp. TBS_079)
MRAATTTALQLARANPVFIRKNFNVVLERTVRELNGESCISLEEAPPPKQQIVCSRSFGE
RVTTYEAMRQAVCQYAERAAEKLRGERQFCRHIAVFVKTSPFAVNEPYYGNVASEKLMTP
TQDTRDIIAAAVKALDRIWMNGHRYAKAGCMLNDFSPTGVSQLNLFDDTQPRSNSNQLMK
VVDGINHSGMGKVWFAGRGIAPEWQMKREMLSPAHNSLE