Protein Info for MPMX20_04466 in Enterobacter sp. TBS_079

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 235 PF04340: DUF484" amino acids 11 to 233 (223 residues), 273.8 bits, see alignment E=5.8e-86

Best Hits

Swiss-Prot: 84% identical to YIGA_SALTY: Uncharacterized protein YigA (yigA) from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)

KEGG orthology group: K09921, hypothetical protein (inferred from 95% identity to enc:ECL_04981)

Predicted SEED Role

"Protein of unknown function DUF484"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (235 amino acids)

>MPMX20_04466 hypothetical protein (Enterobacter sp. TBS_079)
MKQPGEELQETVTELDDSAVVDYLLNNPAFFIRNARLVEQMRVPHPVRGTVSLVEWHMAR
ARNHINQLEENMTLLMEQANNNESLFYRLLHLQARLASAHSLDEFLSRFHRWARELGLAG
ATLRLFPDRWRIGAPSGFTHLALSRQAFEPLRIQRLGHQHHYLGPLNGPELLVVLPEAKA
IGSVAMSLMGRDGDLGVMLFTSRDAHHYEQGQGTHLLQEIALMLPELLERWIERV