Protein Info for MPMX20_04415 in Enterobacter sp. TBS_079

Annotation: Cellulose synthase operon protein C

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1160 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details PF13432: TPR_16" amino acids 275 to 337 (63 residues), 24.8 bits, see alignment 1.4e-08 amino acids 357 to 419 (63 residues), 30.1 bits, see alignment 3.1e-10 amino acids 390 to 444 (55 residues), 18.3 bits, see alignment 1.6e-06 amino acids 609 to 672 (64 residues), 20.6 bits, see alignment 3e-07 PF13181: TPR_8" amino acids 306 to 336 (31 residues), 23.9 bits, see alignment (E = 1.9e-08) PF13176: TPR_7" amino acids 308 to 336 (29 residues), 16.5 bits, see alignment (E = 4.2e-06) PF07719: TPR_2" amino acids 309 to 336 (28 residues), 23.1 bits, see alignment (E = 3.4e-08) PF14559: TPR_19" amino acids 616 to 678 (63 residues), 38.7 bits, see alignment 6.1e-13 PF05420: BCSC_C" amino acids 806 to 1139 (334 residues), 400.1 bits, see alignment E=5.3e-123

Best Hits

Swiss-Prot: 75% identical to BCSC_SALTY: Cellulose synthase operon protein C (bcsC) from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)

KEGG orthology group: None (inferred from 94% identity to enc:ECL_04935)

Predicted SEED Role

"Cellulose synthase operon protein C"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1160 amino acids)

>MPMX20_04415 Cellulose synthase operon protein C (Enterobacter sp. TBS_079)
MRNFTVNLLSLSLGLALMPLAQAANSPQQQQLLQQVRLGESTQREDLVRQSLYRLELIDP
NNPDVIAARFRYLLRQGDNAGAQKELDRLKGIAPGSSAYQSSRNTMLLSTPEGRQQLQQA
RLLATTGHTQEAIAAYDKLFDGNPPGGDVATEYWNVVAKDPARRSVAINQLKKINASSPG
NTQLQGTLAQLLFQTGRRDEGFAVLQEMAKSSNGRSQASDMWYEQIKDQPVSNASVSALQ
KYLSVFSDGDSVAAARTQLDTQQKQLADPTFRAKAQGLAAVDAGQGDKAVADLQKAVSAN
HADSEAVGALGQAYSQKGDRARAVAQFEKAIALDPQSDNRGKWDSLLKVNRYWLLIQQGD
TALKANNTAQAERYYQQARTLDNTDSYAVLGLGDAAAARKDTAAAERYYRQALRMDSGNS
NAVRGLANVYRAQSPEKAAQFIQSLSASQRRSIDDIERSLTNEQLSAQAEQLENQGQYAQ
AAEIQRRRLALSPGDVWITYRLSRDLYSAGQRSQADNLMRQLASQKPSDPEQVYASGLYL
SGNDQDRAALTHLETLPRSQWNANIKELADRLQSNQTLETANRLRDSGKEQEAENLLRQQ
PSSTRIDLTLADWAQQRGDLEAAKTAYNTVLEREPQNEDAILGLTEVYSAQGNKEAARAA
LAKLPAAQNGEPLSLNMQRRIAMAQAGLGDSAAAEQTFSKIIPQAKSQPASMENALVLRD
AARFQTQNGQPQQALETYKDAMVSSGVTTTRPADNDSFTRLTRNDEKDDWLKRGVRSDAG
DLYRQQDVNVTLQHDYWGSSGTGGYSDLKAHTTMLQADAPLADGRMFLRSDLVNMDAGSF
STDNGTYDPKWGTCAETPCSGNTHQSANGASIAVGWQNKTWAWDIGTTPMGFDVVDVVGG
VSYSSDLGPIGYTVNAHRRPISSSLLAFAGQKDTNTGTTWGGVRATGGGASISYDKGEAH
GVWSSLNAETLTGKNVEDNWRVRWMTGYYYKLINKNNERLTVGVSNMLWHYDKDLSGYTL
GQGGYYSPQEYVSFALPVTWRKRTENWSWELGGSVSWSHSKTNDVMRYPIQGLIPTDEPG
RYTDRGEMETGSSSSGTGYTARAIIERRVTSNWFVGLGVDIQEAKDYTPSHALLYVRYSA
AGWQGDMDLPPQPLIPYADW