Protein Info for MPMX20_04321 in Enterobacter sp. TBS_079

Annotation: putative oxidoreductase YhhX

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 345 PF01408: GFO_IDH_MocA" amino acids 4 to 121 (118 residues), 105.2 bits, see alignment E=5.4e-34 PF03447: NAD_binding_3" amino acids 29 to 118 (90 residues), 25.6 bits, see alignment E=2.6e-09 PF02894: GFO_IDH_MocA_C" amino acids 135 to 338 (204 residues), 144 bits, see alignment E=9.1e-46

Best Hits

Swiss-Prot: 88% identical to YHHX_ECOLI: Uncharacterized oxidoreductase YhhX (yhhX) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 91% identity to sty:STY4266)

Predicted SEED Role

"FIG00553873: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (345 amino acids)

>MPMX20_04321 putative oxidoreductase YhhX (Enterobacter sp. TBS_079)
MTLHCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIYRRRAKPEEQSPQYSHIHFTSDLDEV
LNDPQVKLVIVCTHADSHFEYAKRALEAGKNVLVEKPFTPTMAEAKTLFDLAKRKGLTVT
PYQNRRFDSCFLTAKKVIESGKLGDIVEIESHFDYYRPVAETHPGLPQDGSFYGLGVHTL
DQIISLFGRPDHMAYDIRSLRNKANPDDTFEAQLFYGDLKAIVKTSHLVKIDYPKFIVHG
TRGSFIKYGIDQQETSLKANIMPGDPGFAADDSVGVLEYVNAEGITVKEDVKPEAGDYGR
VYDALYETLTIGAPNYVKESEVMANLELLERAFEQASPATITLAR