Protein Info for MPMX20_04298 in Enterobacter sp. TBS_079

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 25 50 75 89 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details PF07338: YdgH_BhsA-like" amino acids 36 to 89 (54 residues), 60.2 bits, see alignment E=8.3e-21

Best Hits

Swiss-Prot: 37% identical to YHCN_ECOL6: Uncharacterized protein YhcN (yhcN) from Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)

KEGG orthology group: None (inferred from 83% identity to ent:Ent638_3824)

Predicted SEED Role

"Putative exported protein precursor"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (89 amino acids)

>MPMX20_04298 hypothetical protein (Enterobacter sp. TBS_079)
MKLVTGIVTSLVIGSLSFGAFAAQELEKDKVAGMNLTKVGEISTSDTTAPMDAKRELSKK
ADELGGKYYVVTSAEKQTKNVRATADVYK