Protein Info for MPMX20_02340 in Enterobacter sp. TBS_079

Annotation: Thiol:disulfide interchange protein DsbD

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 677 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details transmembrane" amino acids 280 to 301 (22 residues), see Phobius details amino acids 322 to 341 (20 residues), see Phobius details amino acids 360 to 383 (24 residues), see Phobius details amino acids 407 to 430 (24 residues), see Phobius details amino acids 437 to 457 (21 residues), see Phobius details amino acids 477 to 495 (19 residues), see Phobius details amino acids 501 to 520 (20 residues), see Phobius details amino acids 527 to 545 (19 residues), see Phobius details PF11412: DsbD_N" amino acids 35 to 143 (109 residues), 68.4 bits, see alignment E=5.8e-23 PF13899: Thioredoxin_7" amino acids 565 to 649 (85 residues), 54.4 bits, see alignment E=1.1e-18

Best Hits

KEGG orthology group: None (inferred from 78% identity to enc:ECL_01939)

Predicted SEED Role

"Membrane protein, suppressor for copper-sensitivity ScsB" in subsystem Copper homeostasis: copper tolerance

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (677 amino acids)

>MPMX20_02340 Thiol:disulfide interchange protein DsbD (Enterobacter sp. TBS_079)
MFNLFRGFVFLWLSCIGIVHAADTGWLVSPQNDHARIRVQAEREQNRILALLTVELQPGW
KTYWRSPGEGGVAPKITWPAGVTDDWHWPVPSRFDISGMTTQGYHDKVIIPITLDGAAGD
ALDGTLTLSTCSNVCLLTDYKLHLDFNQPVDEGFSHAFERAMQAIPATSGVSADLSAWLS
DDKLIITGTTQGQWDKPGIYFDPLEGDILPGEPTLEADGNQLRVTVPVTDEWGDKPTSLQ
GKALSFVLTNGDKAQQTVMTVGATPAEPSAAGVSEGTGKMVLFALLGGLILNLMPCVLPV
MGMKLNSVLHAGSDRRMIRLRFLATSAGILVSFMLLAAMVTALKLTGASLGWGIQFQNPW
FIGLMVAVTFLFALNLFGAFEMLLPSAAAGRLATAGGTGLAGSFCEGMFATLLATPCSAP
FLGTAVAFALGAPLHSLWLIFLMLGVGMSLPWLFVALVPKTAMLLPKPGRWMNGLKIILG
LMMLASSLWLVTLLSPHLGEAVSQSVMLVLIVVAIALLAMTGHKTSPLFWCVVIALSAFG
GYQLRGLLTSPPVTNTASVAQAIPWQPLSEDAIQGALAQGKRVFVDISADWCVTCKVNEH
RVLNQPDVIAALSQPDVVALRGDWSKPSAFIAEFLEKRNRYAIPFNEVYGPGFPEGEMLS
PLLDKDTLIATLNNAKG