Protein Info for MPMX20_02252 in Enterobacter sp. TBS_079

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 357 transmembrane" amino acids 19 to 38 (20 residues), see Phobius details amino acids 47 to 66 (20 residues), see Phobius details amino acids 69 to 95 (27 residues), see Phobius details amino acids 103 to 120 (18 residues), see Phobius details amino acids 126 to 149 (24 residues), see Phobius details amino acids 156 to 174 (19 residues), see Phobius details amino acids 204 to 225 (22 residues), see Phobius details amino acids 255 to 273 (19 residues), see Phobius details amino acids 293 to 316 (24 residues), see Phobius details amino acids 328 to 351 (24 residues), see Phobius details TIGR03408: urea ABC transporter, permease protein UrtC" amino acids 42 to 351 (310 residues), 426.1 bits, see alignment E=5.9e-132 PF02653: BPD_transp_2" amino acids 50 to 340 (291 residues), 147 bits, see alignment E=3.2e-47

Best Hits

KEGG orthology group: K01998, branched-chain amino acid transport system permease protein (inferred from 94% identity to enc:ECL_02015)

Predicted SEED Role

"Urea ABC transporter, permease protein UrtC" in subsystem Urea decomposition

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (357 amino acids)

>MPMX20_02252 hypothetical protein (Enterobacter sp. TBS_079)
MSQPLTLTLARKAPRTTQIAGSLIVACLLVLPFFALLPATHPLAISTWMLTLTGKILCYA
IVAVALDLVWGYAGMLSLGHGIFFALGGYAMGMYLMRQAAGDGLPAFMSFLSWSELPWFW
WGTQHFVWALVLIVMVPGLLALVFGWFAFRSKIKGVYFSIMTQALTYAGMLLFFRNETGF
GGNNGFTGFTTLLGFSVTATTTRIALFLATVMLLLIALGTGFALAKSKFGRILTAVRDAE
NRLTFCGYDPRGFKLLVWTLSAVLCGLAGALYVPQVGIINPGEMSPTNSIEAAIWVALGG
RGTLVGPVIGAALVNGAKSVFTVALPEYWQLFLGLIFIAVTLFLPRGVYGLFRKGEH