Protein Info for MPMX20_02251 in Enterobacter sp. TBS_079

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 524 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details transmembrane" amino acids 232 to 258 (27 residues), see Phobius details amino acids 266 to 285 (20 residues), see Phobius details amino acids 291 to 311 (21 residues), see Phobius details amino acids 323 to 344 (22 residues), see Phobius details amino acids 372 to 392 (21 residues), see Phobius details amino acids 424 to 443 (20 residues), see Phobius details amino acids 456 to 483 (28 residues), see Phobius details amino acids 491 to 509 (19 residues), see Phobius details TIGR03409: urea ABC transporter, permease protein UrtB" amino acids 230 to 521 (292 residues), 424.7 bits, see alignment E=1.2e-131 PF02653: BPD_transp_2" amino acids 233 to 507 (275 residues), 137.7 bits, see alignment E=4.1e-44

Best Hits

KEGG orthology group: K01997, branched-chain amino acid transport system permease protein (inferred from 89% identity to enc:ECL_02016)

Predicted SEED Role

"Urea ABC transporter, permease protein UrtB" in subsystem Urea decomposition

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (524 amino acids)

>MPMX20_02251 hypothetical protein (Enterobacter sp. TBS_079)
MNAIRTIIAIVWLTGLLPGMVQASDADQFVAASRSQQAELLTQWATAPEAARLPLLQALQ
SENLYTDSQKHAFAQRQGAMVPLGETKAAAGQTKAVRLTNRLRNLVATAMATHQLVSDSV
TERRAAARQLQRDAQPEMLDFLQKRVSSETDDVARQSLKLALANLQLASPQAAVRLNAVA
LLGQSDDPDVQSRLTPYTQAATEPDAGVRAAAAESLKLIEHRLMWGDLLGQAFMGLSLGS
VLLLAALGLAITYGLLGVINMAHGEMLMLGAYATWMVQQVMAGLAPQWLALYPIVALPVA
FIVTASIGMVLERTVIRHLYGRPLETLLATWGISLMIIQLVRMTFGAQNLEVANPAWLSG
GVQVFANLTLPWNRIVVLGFVLLVLFFTWLILNKTRLGLNVRAVTQNRSMAACCGVPTGR
VDMLAFGLGSGIAGLGGVALSQLGNVGPELGQGYIIDSFLVVVLGGVGQLAGSVAAAFGL
GIFNKILEPQMGAVLGKILILVAIILFIQKRPQGLFALKGRVTD