Protein Info for MPMX20_02091 in Enterobacter sp. TBS_079

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 112 transmembrane" amino acids 9 to 29 (21 residues), see Phobius details amino acids 35 to 55 (21 residues), see Phobius details amino acids 63 to 81 (19 residues), see Phobius details amino acids 89 to 110 (22 residues), see Phobius details PF02694: UPF0060" amino acids 5 to 111 (107 residues), 151.9 bits, see alignment E=3.3e-49

Best Hits

Swiss-Prot: 96% identical to Y1931_ENT38: UPF0060 membrane protein Ent638_1931 (Ent638_1931) from Enterobacter sp. (strain 638)

KEGG orthology group: K09771, hypothetical protein (inferred from 96% identity to ent:Ent638_1931)

Predicted SEED Role

"Protein of unknown function UPF0060"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (112 amino acids)

>MPMX20_02091 hypothetical protein (Enterobacter sp. TBS_079)
MTVNMLKTTLLFFATALCEIIGCFLPWLWLKKGATVFLLIPAGIALALFVWLLTLHPAAS
GRVYAAYGGVYVCTALLWLRVVDGVKLSAYDWAGALVALCGMLIIVAGWGRA