Protein Info for MPMX20_01761 in Enterobacter sp. TBS_079

Annotation: Flagellar hook-associated protein 1

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 546 signal peptide" amino acids 1 to 18 (18 residues), see Phobius details TIGR02492: flagellar hook-associated protein FlgK" amino acids 3 to 354 (352 residues), 273.2 bits, see alignment E=2.8e-85 PF00460: Flg_bb_rod" amino acids 5 to 35 (31 residues), 29 bits, see alignment (E = 1.7e-10) PF22638: FlgK_D1" amino acids 92 to 328 (237 residues), 269.5 bits, see alignment E=5.3e-84 PF21158: flgK_1st_1" amino acids 336 to 415 (80 residues), 109.4 bits, see alignment E=1.4e-35 PF06429: Flg_bbr_C" amino acids 505 to 545 (41 residues), 29.1 bits, see alignment 1.1e-10

Best Hits

Swiss-Prot: 74% identical to FLGK_ECOLI: Flagellar hook-associated protein 1 (flgK) from Escherichia coli (strain K12)

KEGG orthology group: K02396, flagellar hook-associated protein 1 FlgK (inferred from 93% identity to enc:ECL_02556)

Predicted SEED Role

"Flagellar hook-associated protein FlgK" in subsystem Flagellum

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (546 amino acids)

>MPMX20_01761 Flagellar hook-associated protein 1 (Enterobacter sp. TBS_079)
MSSLINSAMSGLSAAQSALNTVSNNISSYNVAGYTRQTTVLGASNSTLTGGGWVGNGVYV
SGVQREYDAFITNQLRAAQTQSSGLTTRYQQMSKIDDVLSDTTNSLSTTLQDFFKSLQTL
VSNAEDPAARQTVLGKADGLVNQFKTNDQYLRDQDSQVNTAISASVDQINNYAKQIANLN
DQISRLTGVGAGSSPNDLLDQRDQLVSELNKIVGVEVSVQDGGTYNVSFGTGYSLVQGSK
ANQLAAVNSSADPTRTTLAYTDDVSGNIEIPEKLITTGTLGGLLTFRSEDLDKARNSLNQ
MALAFADAMNKQHEAGFDANGDAGGKLFDFGSPAVVSNSKNSGTAALTASVTDSTKVQAT
DYKLQFNGTDWTITRTSDKTSFTMSPDASGNLSFDGLNVNVSGTANNKDSFVVKPVSDVI
VNMELKFNDESKLAMASTSAGGESDNRNGQKLLDLQNSKLVGGNKSFNDAYASLVSTVGS
STAALKTSSETKANVATQLTKQQQSISGVNLDEEYGNLQRYQQYYLANAQVLQTASSLFD
AIINIR