Protein Info for MPMX20_01199 in Enterobacter sp. TBS_079

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 304 PF00126: HTH_1" amino acids 11 to 69 (59 residues), 49 bits, see alignment E=4.7e-17 PF03466: LysR_substrate" amino acids 97 to 290 (194 residues), 76.5 bits, see alignment E=2e-25

Best Hits

KEGG orthology group: None (inferred from 42% identity to cse:Cseg_1703)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (304 amino acids)

>MPMX20_01199 hypothetical protein (Enterobacter sp. TBS_079)
MKKMTSQNFSWDDLKTVMAIGEHGNLSRAADALGINHSTLFRRLGAIETSLALALFLRRR
THYVPTKAGTALIALGHRIEEDIYYVLQNIEEDECGFSGEIRVTTSDALLQDYLNPLIAS
FSRVNPHITFQVSTGNESVNLFDGGADIAFRATRDIPEHLSGRKVGSAFWAVYGLREQWE
KKQVNAMALTEHRWVSFHYAMSKLNAFLWIEKNIPEKNITFRGDSVLSVASAISSGIGIG
LLPCMHGNQIDKLAQISPIVEGLGEDIWLLAHPDVRKSAKIREFMNHCSHYLAENRKRIF
GQTC