Protein Info for MMP_RS08490 in Methanococcus maripaludis S2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

No protein families (PFam or TIGRFam), signal peptides, or transmembrane helices were found in this protein.

Best Hits

KEGG orthology group: None (inferred from 100% identity to mmp:MMP1653)

Predicted SEED Role

"Predicted NTPase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (archaea)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q6LWQ4 at UniProt or InterPro

Protein Sequence (1025 amino acids)

>MMP_RS08490 hypothetical protein (Methanococcus maripaludis S2)
MYRELSKEELLEKFDEYITSEDIKKRAESTKILGYLGINDIKSRMDNILSLTFENDISIR
LNLITAFSNILNKFPEVFSELIGCIYYNTEFSNNILSEHAKNEIKALGPEVIERHVEHFR
NGIYSKNTEERLKSVILLSLISRFSPEYLDKALSEIVMASTYDSSALIQLLALGTLDDFS
EINRNFLRYSYLVFNKKMDITPLNKSKTGAEITKSLIRLTVSDEIDGNTINELLKYLSIE
NDFCTLLAAISLQNNILKVEKNFEDYPLIFQDQLSKFYKKHPNNVQQLISYSLILDITHS
LNLEIKNVDFEKIFYYLKKNISGKDHISKAFSLIILYLLHKMEKLNLDEEIDEIFDNYPF
ENILKEHPLCYYFGMPLLAEKYNTLPEVDKSPYLIRSLELKMQYMAPTERHHYIKSAEKN
IKSDYWLERYNGAKKIGSALYFDESKEFMDFELVKSIIHDEIYLVRNIGIWILRILVKYN
IKLPERIILEVIHDLNSPYWELRFEYYLLLNELLEKRPELLTEFNTASKIKSILGSHYVN
ENYPPFKIAIKSILDKILKNLENTPKKFQDELSGELYSEQLFENPVTSAAFLEKLKINLD
SYILKNDEKNILKVLTFLKTHESKVDCSYLLEELVKLKDNYPDANYFLNNIKNRYKLIPK
PLEIRILNSLNNPIPEYKKDGLEEIITYLNEGFKINNGIGLKIKEILVMYRDEKLTDLCI
NILNLQNDIESKRLIFEKREFDTHLNDLKEIKEKSDENIKQMSTEELYVKLSSQLHKTSE
YDYQSINFNDILYFLSDYSKRPSVILTTMILKILKNVITDPNSNILNSPDIDNPKVLENL
YYLIYSTDYEILSKNAIILTVEIVKNKPEWLLRNITNVSKNKNWPLFLNSLLDYPDNKVL
GETINAFNYYAKNSNSFDLSAEFLEKLVNRLDTSNWENFKKIVKVLGNYEMDEKMLNRFS
KLLLEKIENSNDDSKLILLRFFKIQDISRLNSNLVAQLLNLKNSKNYDIKRDIEEIESMK
IKLRG