Protein Info for MMP_RS05435 in Methanococcus maripaludis S2

Annotation: 5'/3'-nucleotidase SurE

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 264 TIGR00087: 5'/3'-nucleotidase SurE" amino acids 3 to 248 (246 residues), 270.1 bits, see alignment E=8.7e-85 PF01975: SurE" amino acids 5 to 199 (195 residues), 185.4 bits, see alignment E=4.8e-59

Best Hits

Swiss-Prot: 100% identical to SURE_METMP: 5'-nucleotidase SurE (surE) from Methanococcus maripaludis (strain S2 / LL)

KEGG orthology group: K03787, 5'-nucleotidase [EC: 3.1.3.5] (inferred from 100% identity to mmp:MMP1051)

Predicted SEED Role

"5-nucleotidase SurE (EC 3.1.3.5)" in subsystem Folate Biosynthesis (EC 3.1.3.5)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.1.3.5

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (archaea)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q6LYE0 at UniProt or InterPro

Protein Sequence (264 amino acids)

>MMP_RS05435 5'/3'-nucleotidase SurE (Methanococcus maripaludis S2)
MTMEILLVNDDGIYSNGLLALKNVICEEFDANVTVVAPTNQQSGIGRAISLFEPLRITKT
KLADCSEGYAVSGTPTDCVVLGVHQVLKKVPDYIISGINIGENLGTEITTSGTLGAAFEG
AHHGAKSFACSLQVTTDHLKFKEGESPIEFMTAARIVKNVFKKFLDDEFPCDVVNINVPD
NATENTPVEITKLAKRMYSMHVEERIDPRSRSYYWLDGYPVMDEEDGTDVYAVRNKRNVS
VTPLTLDNTAKNIDEFKEKYGKKF