Protein Info for LRK55_RS17920 in Rhodanobacter denitrificans MT42

Annotation: UTP--glucose-1-phosphate uridylyltransferase GalU

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 291 signal peptide" amino acids 1 to 28 (28 residues), see Phobius details TIGR01099: UTP--glucose-1-phosphate uridylyltransferase" amino acids 5 to 269 (265 residues), 337.7 bits, see alignment E=2.6e-105 PF00483: NTP_transferase" amino acids 13 to 273 (261 residues), 107 bits, see alignment E=6.1e-35

Best Hits

KEGG orthology group: K00963, UTP--glucose-1-phosphate uridylyltransferase [EC: 2.7.7.9] (inferred from 70% identity to smt:Smal_1652)

Predicted SEED Role

"UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)" (EC 2.7.7.9)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.7.9

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (291 amino acids)

>LRK55_RS17920 UTP--glucose-1-phosphate uridylyltransferase GalU (Rhodanobacter denitrificans MT42)
MSKPLRKVVFPVAGLGTRFLPATKVVAKEMLPVLDKPLIQYAVDEAVDAGADTLVFVTNR
YKHAIADYFDKAYELESKLHEKGKAELLALVQGTLPRHVRAIFVTQPEALGLGHAVLCAK
PVVGDEPFGVILPDDLIWNGSGKGALRQMAELADAQGAGVIAVEEVPHDQTDKYGIVDAV
PVDERSALIRHMVEKPKPADAPSNLAVVGRYVLPGRIFQLLEQTTPGAGGEIQLTDAIDA
LLKEQGKVLAYRFEGTRFDCGNKAGLVRATMHMAMQDPKLAPTVREFLGQL