Protein Info for LRK55_RS17420 in Rhodanobacter denitrificans MT42

Annotation: acetyl-CoA hydrolase/transferase C-terminal domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 647 PF13336: AcetylCoA_hyd_C" amino acids 364 to 528 (165 residues), 116.4 bits, see alignment E=5.7e-38

Best Hits

KEGG orthology group: None (inferred from 53% identity to xac:XAC3364)

Predicted SEED Role

"Acetyl-CoA hydrolase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (647 amino acids)

>LRK55_RS17420 acetyl-CoA hydrolase/transferase C-terminal domain-containing protein (Rhodanobacter denitrificans MT42)
MSIEHRYADTDACARDLADGLGPHLRIAAPLGLGKPHGLLNALYRLVAADAGRSMRLYTA
LSLTRPQPTPGLEQRFLGPFLERHFGADAVDPHYALDQARDALPANVEVHEFYLQSGALL
RSASAQRSYISQNYTHVARDLALQDINLLVQLVARREGPDGVHYSLSCNPDLTLDLLRRL
QSSGRPRPLCVAVVHPELPYLGGDAEVAEAYFDVELRPPTSPPLFALPRSPVGLAEYALG
LHASALVRDGGCLQIGIGALSDALVKALLLRQHDNTRWRQALAALDPAGATRVLAEQQGG
LAPFEAGLYGASEMVMDGFMHLQRGGILKRRSWDNLALERAAAAGRLNPATPGGHYLRGA
FFLGSRELYAWLAATEAADPDAIDMCAVSNVNQLYGDHQALAMLQRRGARFFNTCMMATV
LGAAVSDTLEDGAVVSGVGGQYNFVAMAHELPDARSALLLRATRESRGGIESNIRWSYGQ
TTIARHLRDIVVTEYGIADLRGKSDGECVEAMLSIADARFLDALCAQAKAHGKLAADFVV
PEAWRRHRPEHLHEALAPLRHEGVLPAFPFGSDFTEVEQRLLPALEWLKACSGHWRGRWR
LLGAVVRPGDVVDGESEALARMGLDAPASWSGRAQRRLLQTALRRQR