Protein Info for IAI47_18180 in Pantoea sp. MT58

Annotation: UDP-N-acetylmuramate dehydrogenase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 345 TIGR00179: UDP-N-acetylenolpyruvoylglucosamine reductase" amino acids 12 to 332 (321 residues), 351.6 bits, see alignment E=1.6e-109 PF01565: FAD_binding_4" amino acids 24 to 152 (129 residues), 76.9 bits, see alignment E=1.3e-25 PF02873: MurB_C" amino acids 209 to 332 (124 residues), 105.7 bits, see alignment E=1.2e-34

Best Hits

Swiss-Prot: 63% identical to MURB_SHIFL: UDP-N-acetylenolpyruvoylglucosamine reductase (murB) from Shigella flexneri

KEGG orthology group: K00075, UDP-N-acetylmuramate dehydrogenase [EC: 1.1.1.158] (inferred from 94% identity to pva:Pvag_3452)

MetaCyc: 63% identical to UDP-N-acetylenolpyruvoylglucosamine reductase (Escherichia coli K-12 substr. MG1655)
UDPNACETYLMURAMATEDEHYDROG-RXN [EC: 1.3.1.98]

Predicted SEED Role

"UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158)" in subsystem Peptidoglycan Biosynthesis or UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis (EC 1.1.1.158)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.1.1.158 or 1.3.1.98

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (345 amino acids)

>IAI47_18180 UDP-N-acetylmuramate dehydrogenase (Pantoea sp. MT58)
MSSQHPSLKADNTLGLEVHTQKRIVAETPAAILAAWQASQRDQTPFMVLGEGSNVLFLDD
FAGTVVLNRIKGINIQDEYEYWKLHVGAGENWHQLVKSTLEKGITGLENLALIPGMTGSA
PIQNIGAYGVELKDVCEYVDVLNLDSGETERLDREACEFGYRDSIFKHRYQRGYVIVAVG
IILPKQWQPVLTYGDLKTLNPVTASAWDVYHAVCQMRQSKLPDPKVTGNVGSFFKNPVVT
EAQCSALLAHFPAMPHYLMPNGETKLAAGWLIDQCQLKGYRIGGAAVHQQQALVLINADN
ATPDDIVALAKTVRAKVGEKFDVWLEPEVRFIQAQGECNAVGVIA