Protein Info for IAI47_17795 in Pantoea sp. MT58

Annotation: DMT family transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 319 transmembrane" amino acids 7 to 25 (19 residues), see Phobius details amino acids 31 to 51 (21 residues), see Phobius details amino acids 64 to 83 (20 residues), see Phobius details amino acids 93 to 113 (21 residues), see Phobius details amino acids 125 to 143 (19 residues), see Phobius details amino acids 155 to 174 (20 residues), see Phobius details amino acids 194 to 216 (23 residues), see Phobius details amino acids 231 to 252 (22 residues), see Phobius details amino acids 262 to 283 (22 residues), see Phobius details amino acids 289 to 306 (18 residues), see Phobius details PF00892: EamA" amino acids 3 to 114 (112 residues), 42.2 bits, see alignment E=4.7e-15 amino acids 158 to 305 (148 residues), 28.4 bits, see alignment E=8.3e-11

Best Hits

Swiss-Prot: 63% identical to YTFF_ECOLI: Inner membrane protein YtfF (ytfF) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 93% identity to pva:Pvag_3533)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (319 amino acids)

>IAI47_17795 DMT family transporter (Pantoea sp. MT58)
MFAGVMFAVTAGLMWGLIFVGPLLVPDYPGALQSAGRYVAFGLIALPLAWHGRHRLRQLA
RADWLEAVKLSLVGNLFYYAFLANAIQRTGGPVSTMIIGTLPVVIAVTANLCYGHLEGRL
PWRRLFPALVMMAAGLLCVNAAELKSQGQLLDLSRYLTGIVLALLAVVCWTWYPLRNARW
LRTHPELRPSTWATAQGLVTLPMALIMYALVSVQLTWLQPDFSLPFGPRPGVFISLMLTI
GLLCSWLGTLCWNAASQRLPTVLMGPLIVFEILFGLLWTFLWYQSWPPQLTVTGIVCLLA
GVLWAMRIKPQPLVVSLNE