Protein Info for IAI47_01800 in Pantoea sp. MT58

Annotation: DUF3459 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 561 transmembrane" amino acids 404 to 424 (21 residues), see Phobius details PF00128: Alpha-amylase" amino acids 83 to 337 (255 residues), 70.1 bits, see alignment E=1.3e-23

Best Hits

Swiss-Prot: 62% identical to GGAP_ECOLI: Glucosylglycerate phosphorylase (ycjM) from Escherichia coli (strain K12)

KEGG orthology group: K00690, sucrose phosphorylase [EC: 2.4.1.7] (inferred from 95% identity to pva:Pvag_2956)

MetaCyc: 62% identical to glucosylglycerate phosphorylase (Escherichia coli K-12 substr. MG1655)
RXN-18999 [EC: 2.4.1.352]

Predicted SEED Role

"Putative sucrose phosphorylase (EC 2.4.1.7)" in subsystem Maltose and Maltodextrin Utilization (EC 2.4.1.7)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.4.1.352 or 2.4.1.7

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (561 amino acids)

>IAI47_01800 DUF3459 domain-containing protein (Pantoea sp. MT58)
METITDLIDKIYAGTFPEATLARLKADIATAREAIKLPRKAHWDEQDVVLITYADQFRET
DKPTLNTFSRFYQQHLQSTFPLVHLLPFFPWSSDDGFSVINYHEVDPVCGDWQDISRLHQ
ETRLMFDFVCNHMSAKSAWFSHFLAQDPGWDDFFISMPPSTDLSAVTRPRTSPLLTPFKM
ADGDTRFIWTTFSADQIDLNFANPEVLLRMVNVLLDYLVRGADYVRLDAVGYMWKTPGTR
CIHLEKTHQLVKLFRAIANHVAPGTVIITETNVPHQDNISYLGNGHDEAQMVYQFSLPPL
VLHAIHTGSARALRQWASSLDLSSNDTTFFNFLASHDGIGLNPARGILSEVEIVSLVRDL
ALEGALVSYKNNPDGSTSPYEINVTFLDALNREADDDATRLKRFLLAHAILLVFPGVPAI
YIQSILGGRNHYDGVRAAGHNRAINRQKYDLQQIEAALAGGDWLRQQIYTRLSQLIQLRR
RQPAFHPDNPMTIYDSENALLVLSRHQPESGGGLLCVFNLSGRSVETRLPVAHTLQDVVS
GEKIDGTQPVKLDAWQFMWLR