Protein Info for HSERO_RS22795 in Herbaspirillum seropedicae SmR1

Annotation: N-acetyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 173 PF13420: Acetyltransf_4" amino acids 3 to 154 (152 residues), 58.3 bits, see alignment E=3.4e-19 PF13302: Acetyltransf_3" amino acids 3 to 137 (135 residues), 47.2 bits, see alignment E=1.3e-15 PF00583: Acetyltransf_1" amino acids 17 to 136 (120 residues), 80.9 bits, see alignment E=3.2e-26 PF13673: Acetyltransf_10" amino acids 40 to 140 (101 residues), 45.4 bits, see alignment E=2.9e-15 PF13508: Acetyltransf_7" amino acids 52 to 138 (87 residues), 52.3 bits, see alignment E=2.2e-17 PF12746: GNAT_acetyltran" amino acids 76 to 139 (64 residues), 28 bits, see alignment E=5.8e-10 PF08445: FR47" amino acids 84 to 138 (55 residues), 40.4 bits, see alignment E=8.6e-14

Best Hits

Swiss-Prot: 63% identical to MNAT_ECOLI: L-amino acid N-acyltransferase MnaT (mnaT) from Escherichia coli (strain K12)

KEGG orthology group: K03823, phosphinothricin acetyltransferase [EC: 2.3.1.183] (inferred from 100% identity to hse:Hsero_4562)

MetaCyc: 63% identical to L-amino acid N-acyltransferase (Escherichia coli K-12 substr. MG1655)
Amino-acid N-acetyltransferase. [EC: 2.3.1.1]

Predicted SEED Role

"GCN5-related N-acetyltransferase"

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.3.1.1, 2.3.1.183

Use Curated BLAST to search for 2.3.1.1 or 2.3.1.183

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See D8IWZ1 at UniProt or InterPro

Protein Sequence (173 amino acids)

>HSERO_RS22795 N-acetyltransferase (Herbaspirillum seropedicae SmR1)
MQIRDAELADIAGITPIYNDAVANTTAIWNETLVDDRNREDWLTARRQSGYPVLVAVADG
KVLGYASFGDWRAFDGYRHTVEHSVYVHKDHRGEGLGRALMEALIARARALGKHVMVAGI
DASNSGSINLHKKLGFEQVGYLPQVGTKFGKWLDLAFLQLMLDGRTEPDRIGG