Protein Info for HSERO_RS13750 in Herbaspirillum seropedicae SmR1

Annotation: chromosome partitioning ATPase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 346 TIGR03018: exopolysaccharide/PEP-CTERM locus tyrosine autokinase" amino acids 121 to 325 (205 residues), 263.7 bits, see alignment E=4.4e-83 PF13614: AAA_31" amino acids 164 to 319 (156 residues), 37.2 bits, see alignment E=1.5e-13

Best Hits

KEGG orthology group: None (inferred from 100% identity to hse:Hsero_2740)

Predicted SEED Role

"Protein-tyrosine kinase (EC 2.7.1.112)" (EC 2.7.1.112)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.1.112

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See D8IYQ1 at UniProt or InterPro

Protein Sequence (346 amino acids)

>HSERO_RS13750 chromosome partitioning ATPase (Herbaspirillum seropedicae SmR1)
MSIIERAASRLKTTAAQRPAGSSELLSAAELAAQQQPAQVQVQAHQQVQQPAHQQQEPLP
SQPQHPLQAAPATTATAAQPAPVALASSMEAPAPAVRSSSAKRIEINLERLASMGFLTPG
SRSLVSEQFRMIKRSLLRQAFAPREAGSKPGNLIMVTSALPDEGKTFCSINLALSIAMEL
DHTVLLVDADVARPSVLRTFDLAEDEGAGMMNLLLDDKVDMADVLLKTNVDTLSVLPVGA
RHSHSSELLASQSMQLLLEEIANRYPDRIVIFDSPPLLVTSEASVLASRMGQIAVVVAAE
STSQQAVKSALNQLKGCQNVSLIYNKSMAFAGSQEYGYGYGYGDRY