Protein Info for HSERO_RS10400 in Herbaspirillum seropedicae SmR1

Annotation: inorganic phosphate transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 335 signal peptide" amino acids 1 to 34 (34 residues), see Phobius details transmembrane" amino acids 49 to 72 (24 residues), see Phobius details amino acids 85 to 105 (21 residues), see Phobius details amino acids 112 to 133 (22 residues), see Phobius details amino acids 140 to 166 (27 residues), see Phobius details amino acids 221 to 243 (23 residues), see Phobius details amino acids 256 to 278 (23 residues), see Phobius details amino acids 309 to 331 (23 residues), see Phobius details PF01384: PHO4" amino acids 25 to 324 (300 residues), 313.9 bits, see alignment E=6.3e-98

Best Hits

Swiss-Prot: 63% identical to PIT_RHIME: Probable low-affinity inorganic phosphate transporter (pit) from Rhizobium meliloti (strain 1021)

KEGG orthology group: K03306, inorganic phosphate transporter, PiT family (inferred from 100% identity to hse:Hsero_2081)

Predicted SEED Role

"Probable low-affinity inorganic phosphate transporter" in subsystem Phosphate metabolism

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See D8IT22 at UniProt or InterPro

Protein Sequence (335 amino acids)

>HSERO_RS10400 inorganic phosphate transporter (Herbaspirillum seropedicae SmR1)
MQTIQISLHILALLIVLALLFDFMNGFHDAANAIATVVSTGVLRPQTAVAMAAFFNLAAV
FVFHQLHVAASVGKGTIEPAIVDQYVIFGALIGAIFWNLVTWYYGIPSSSSHALIGGLVG
SAVAKAGTGALISAGLLKTILFIVLSPLLGLVFGSLMMLVVSWIFFRSTPRKIDGWFRRL
QLLSASMYSLGHGGNDAQKTIGIIWMLLIASGYSSPEAPPMWVIISCYCAISLGTLFGGW
RIVKTMGQKITKLKPVGGFCAETGGAITLFIATALGIPVSTTHTITGAIVGVGAAQKMSA
VRWGVASNIVWAWIFTIPASAFVAAIAWWIGVHVL