Protein Info for HSERO_RS09995 in Herbaspirillum seropedicae SmR1
Annotation: N-acetylglucosaminyldiphospho-UDP N-acetyl-beta-D-mannosaminyltransferase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
KEGG orthology group: K05946, N-acetylglucosaminyldiphosphoundecaprenol [EC: 2.4.1.187] (inferred from 100% identity to hse:Hsero_2000)Predicted SEED Role
"N-acetylmannosaminyltransferase (EC 2.4.1.187)" in subsystem Teichoic and lipoteichoic acids biosynthesis (EC 2.4.1.187)
MetaCyc Pathways
- Salmonella enterica serotype O:54 O antigen biosynthesis (1/5 steps found)
- poly(3-O-β-D-glucopyranosyl-N-acetylgalactosamine 1-phosphate) wall teichoic acid biosynthesis (2/10 steps found)
- poly(glycerol phosphate) wall teichoic acid biosynthesis (2/11 steps found)
- poly(ribitol phosphate) wall teichoic acid biosynthesis I (B. subtilis) (2/12 steps found)
- poly(ribitol phosphate) wall teichoic acid biosynthesis II (S. aureus) (2/14 steps found)
Isozymes
No predicted isozymesUse Curated BLAST to search for 2.4.1.187
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See D8ISF7 at UniProt or InterPro
Protein Sequence (373 amino acids)
>HSERO_RS09995 N-acetylglucosaminyldiphospho-UDP N-acetyl-beta-D-mannosaminyltransferase (Herbaspirillum seropedicae SmR1) IAGAPDFQRDVWSILGLPFDRVSLGQAAGILQRAASERRRCFLSTPNLNFAVACLDDAAF RHSVIQSDLSIADGMPLVWIARALGLPIKERVAGSSLFQALREQRMENGQAPLRVYFFGG PPGVAQAADEKLNATPSGLRSVGYASPGFGSIEEMSPPQALAHINDSRADFLVVALGAKK GQAWIQHNLVQLRAPVVSHLGAVVNFVAGTVSRAPRWAQKTGLEWLWRIKEEPKLWRRYF DDGMALLRLLATRVLPCIWESRRHRPAAALLDEAEIRCRLDGGDCELLFSGALGQANLAR LRPVLAQAAQGDAPLVLDCTRLQYIDSAALAQLMLLYGDCVRRGRPWAIINASASLRRQI TLHCADYLLQARA