Protein Info for HSERO_RS01735 in Herbaspirillum seropedicae SmR1

Annotation: ATPase AAA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 291 PF05673: DUF815" amino acids 34 to 288 (255 residues), 349.5 bits, see alignment E=8.8e-109 PF00004: AAA" amino acids 91 to 194 (104 residues), 21.8 bits, see alignment E=2.3e-08

Best Hits

KEGG orthology group: K06923, (no description) (inferred from 100% identity to hse:Hsero_0350)

Predicted SEED Role

"putative ATP/GTP-binding protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See D8IW78 at UniProt or InterPro

Protein Sequence (291 amino acids)

>HSERO_RS01735 ATPase AAA (Herbaspirillum seropedicae SmR1)
MTQLDQFLQRAEALLARVEAILPQAAAREPDWNAAVAFRWRGATAQRPGYLQAVGHISQI
GLSDLHNIGPQKEQIDQNTRQFVEGRPANNVLLTGARGTGKSSLIKACLNQYADRGLRLI
EVDKDDLHDLQDIVELVAARPERFIVFCDDLSFEEGEGGYKALKVALDGSIAAQSDNVLI
YATSNRRHLMPERLSDNSTYTHTEDGDLHPGETVEEKISLSERFGLWVTFYPFKQDDFLE
IVAHWLRHFGCNDAQIAEARADALRWALQRSSRSGRVAWQFARDYAGKAQR