Protein Info for HMPREF1058_RS11090 in Phocaeicola vulgatus CL09T03C04

Annotation: ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 575 PF09820: AAA-ATPase_like" amino acids 9 to 307 (299 residues), 274.9 bits, see alignment E=8e-86 PF08011: PDDEXK_9" amino acids 464 to 574 (111 residues), 90.2 bits, see alignment E=8.3e-30

Best Hits

KEGG orthology group: None (inferred from 100% identity to bvu:BVU_1114)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See I8ZX38 at UniProt or InterPro

Protein Sequence (575 amino acids)

>HMPREF1058_RS11090 ATP-binding protein (Phocaeicola vulgatus CL09T03C04)
MMENIKEIPYGIANFVEVAEQNMYYVDKTMYLPLLEKQPRNLFFIRPRRFGKSIFLSMLR
AYYDIAQKEKFQKRFGNLWIGSRPTPLQGKFQVVYLDFSRASGGSGSLEENFNNYCGMVM
DLFGKVYEPYYFPGFAQKMEEQPDFVSKLNYLNLHAAESGMKLYLIIDEYDNFTNIVLNE
QGKDIYHALTHASGFYREIFKKFKGMFERIFMTGVSPVTLDDLTSGFNIGWNISTDYQFN
MMLGFSETDVRTMFQYYKDAGQLPIDADIEAMIREMKPWYNNYCFAEESLERDPKMFNCD
MVLYYLRNYITLGKSPKEMIDPNTRTDYNKMKKLIQLDKLDGNRKGVLRKITEEGQIITN
LITTFPAKEIAKPEIFPSLLFYYGMLTITATRGSRLVLSIPNYNVRKQYYEFMLEEYQDK
RHINLNNLMDLFDEMAYEGYWRKTLEFIAHAYKENSSVRSAMEGERNIQGFFTAYLSVNA
YYLMAPEMELSHGYCDLFLMPDLMRYEVKHSYILELKYLSVKDTEEKTRTQWQEAVKQIN
EYAAAPRVRQLVQNTKLHCIIIQFRGWELERMEEV