Protein Info for HMPREF1058_RS04655 in Phocaeicola vulgatus CL09T03C04

Annotation: phosphatase PAP2 family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 205 transmembrane" amino acids 7 to 25 (19 residues), see Phobius details amino acids 61 to 78 (18 residues), see Phobius details amino acids 87 to 107 (21 residues), see Phobius details amino acids 119 to 138 (20 residues), see Phobius details amino acids 145 to 164 (20 residues), see Phobius details amino acids 170 to 192 (23 residues), see Phobius details PF01569: PAP2" amino acids 90 to 193 (104 residues), 59.6 bits, see alignment E=1.4e-20

Best Hits

KEGG orthology group: None (inferred from 100% identity to bvu:BVU_3834)

Predicted SEED Role

"PAP2 superfamily protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See I9IQ08 at UniProt or InterPro

Protein Sequence (205 amino acids)

>HMPREF1058_RS04655 phosphatase PAP2 family protein (Phocaeicola vulgatus CL09T03C04)
MIGKIKMMAIITFYVAVLLVIAVYLQDGSGTFSHFFENANLYIRNLRNVHAPAFHQTYDN
YLQLFPLILLFGLKLGGIRGNFGWKRLFTFIVLSVVLTQLVVNGLKLTTGVLRPDATNYF
SFPSGHTAAAFMAATLLYKEYGFKGYWVGLVAYAAAIVTGFARILNNRHWLFDVIIGAAL
GILLTDLAFRLVQLIFKDRGLIQHK