Protein Info for H281DRAFT_01069 in Paraburkholderia bryophila 376MFSha3.1

Annotation: Cytosine/adenosine deaminase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 474 PF01979: Amidohydro_1" amino acids 58 to 420 (363 residues), 175.3 bits, see alignment E=2.1e-55 PF07969: Amidohydro_3" amino acids 148 to 413 (266 residues), 43.8 bits, see alignment E=2.6e-15

Best Hits

Swiss-Prot: 82% identical to IXPDE_UNKP: Isoxanthopterin deaminase from Unknown prokaryotic organism

KEGG orthology group: None (inferred from 81% identity to bxe:Bxe_A2016)

Predicted SEED Role

"BOX elements"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (474 amino acids)

>H281DRAFT_01069 Cytosine/adenosine deaminase (Paraburkholderia bryophila 376MFSha3.1)
MSILIRNAAAIMTGGNGSAEEPARVDGPDIRIEGETIAAIGRLAPREGETIVDASDCVVY
PAWVNTHHHLFQSLLKGDPAGLNASLTPWLAATPYRFRVLFDEKRFRLAARIGLIELMRS
GCTTVADHNYLYYPGMPFDSSAILFDEADKLGLRFVLLRGGATRTRQLEAELPTALRPES
LDAYLADIERLASTYHDASPRAMRRVAMAPTTVLYSISPHEMRETASVARRLGLRMHSHL
SETVGYQDSAKAMHGATPVEFCGEYDWLGDDVWFAHLVKLDAHEIALLAETRTGVAHCPQ
SNGRLGSGIAPVRQMADAGVRVSIGVDGAASNEAADMISEVHMAWLAQRARRGMAAQPVY
RGGTFEGGADAASVEEVVHWGTAGGARVLGLEGVGRIAPGYSADIAVYRLDDPRYFGLHD
PAIGPVASGGRPTVAALFSAGRCVVKDDAVANVDLGELRRQALAEVSGILAEVA