Protein Info for H281DRAFT_00958 in Paraburkholderia bryophila 376MFSha3.1

Annotation: Membrane protein involved in the export of O-antigen and teichoic acid

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 488 transmembrane" amino acids 9 to 31 (23 residues), see Phobius details amino acids 40 to 62 (23 residues), see Phobius details amino acids 83 to 109 (27 residues), see Phobius details amino acids 126 to 149 (24 residues), see Phobius details amino acids 161 to 179 (19 residues), see Phobius details amino acids 185 to 204 (20 residues), see Phobius details amino acids 223 to 241 (19 residues), see Phobius details amino acids 305 to 328 (24 residues), see Phobius details amino acids 335 to 359 (25 residues), see Phobius details amino acids 380 to 406 (27 residues), see Phobius details amino acids 422 to 442 (21 residues), see Phobius details amino acids 448 to 471 (24 residues), see Phobius details PF01943: Polysacc_synt" amino acids 5 to 287 (283 residues), 66.3 bits, see alignment E=4.8e-22 PF01554: MatE" amino acids 14 to 153 (140 residues), 30.3 bits, see alignment E=4.7e-11 PF13440: Polysacc_synt_3" amino acids 32 to 331 (300 residues), 51.8 bits, see alignment E=1.1e-17

Best Hits

KEGG orthology group: None (inferred from 96% identity to bgf:BC1003_1683)

Predicted SEED Role

"FIG00468008: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z5MB16 at UniProt or InterPro

Protein Sequence (488 amino acids)

>H281DRAFT_00958 Membrane protein involved in the export of O-antigen and teichoic acid (Paraburkholderia bryophila 376MFSha3.1)
MDKGILKNVAINFFGLVLPTFVSLVTVPSYIRLLGVERYGVISLVWTLIGYFGILDLGMS
MAAQNHISKARASGNKDESARVFWSATWLNLATGVIGGLIIYFGAFLYTAYFTKVSPELQ
HEVYMALPWLAVAIPIANVSWVFAGAINGAERFGIYNTNQTIGTFLFQLLPLGAALWLGA
SLQNVLAAAVFARVLAAILLGRSALKVLEIRSILPPQLGVAKGLFNFGGWMLIASVTNMI
AESLDRVMLGTSLGARFVTYYTVPQNLVTRLNIVPTAMVRTLFPRLSAVGRADADTITQQ
SLEFLNGVFTPVALIAMLVLEPFLHLWVGNEIASVAAPVGRIMIVAVWLVGQANVTRILI
QSQVNPATAARVGLFELPLFAGALWFGITHFGLTGAAIAVAGRALFDYAVLLRLSAIRAR
QIALDMLAHLAFLLASLWLSSFLPGLPMAIVAGLLMVGANIAWSITMTPALRDLARSLLL
RLNPRKSA