Protein Info for Ga0059261_3032 in Sphingomonas koreensis DSMZ 15582

Annotation: Predicted acyltransferases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 399 transmembrane" amino acids 24 to 44 (21 residues), see Phobius details amino acids 57 to 80 (24 residues), see Phobius details amino acids 101 to 123 (23 residues), see Phobius details amino acids 144 to 165 (22 residues), see Phobius details amino acids 176 to 194 (19 residues), see Phobius details amino acids 208 to 231 (24 residues), see Phobius details amino acids 243 to 262 (20 residues), see Phobius details amino acids 269 to 288 (20 residues), see Phobius details amino acids 309 to 328 (20 residues), see Phobius details amino acids 339 to 357 (19 residues), see Phobius details PF01757: Acyl_transf_3" amino acids 20 to 356 (337 residues), 89.9 bits, see alignment E=8.7e-30

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1L6JFA3 at UniProt or InterPro

Protein Sequence (399 amino acids)

>Ga0059261_3032 Predicted acyltransferases (Sphingomonas koreensis DSMZ 15582)
MTGNDPAGRAGAAAVNPAFLYMDALRAVLALVVAFGHIWALLIADYRPTDDLLVKSLYLA
AGFGHPAVILFFVLSGFWITRSILLTPPARWTWSGYLKDRLVRLLLVVVPALLLGGLFDF
AGVATSSPTHLGQTGSYVLPRSVATYLTLPDFLGNLVFLQGLVVAPFGSNGPLWSLAYEF
WFYIWFPALWFALTQRRFSFALLTLALGIVYPDLFFHFLSWLFGTLLFLVYRWCEANRTR
VGAIRDTLWLPGALLFVATLAWGRTGAFAAEDPVLAFSFAMLLLGLLLRRTPALPGIAHL
ARYGRETSFSLYAIHFPLMALATAALIAAERLPPDPQAIAWALAILAASAFAAWGFARGT
ESHTARVRDWLGRATSAGTQRLAATESGMVLGRRRHDRR