Protein Info for Ga0059261_2293 in Sphingomonas koreensis DSMZ 15582

Annotation: cell division ATP-binding protein FtsE

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 235 transmembrane" amino acids 34 to 48 (15 residues), see Phobius details TIGR02673: cell division ATP-binding protein FtsE" amino acids 4 to 218 (215 residues), 284.3 bits, see alignment E=3e-89 PF00005: ABC_tran" amino acids 21 to 168 (148 residues), 115.6 bits, see alignment E=2.8e-37

Best Hits

Swiss-Prot: 44% identical to FTSE_ECO57: Cell division ATP-binding protein FtsE (ftsE) from Escherichia coli O157:H7

KEGG orthology group: K09812, cell division transport system ATP-binding protein (inferred from 76% identity to sch:Sphch_2354)

Predicted SEED Role

"Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)" in subsystem Bacterial Cell Division (TC 3.A.5.1.1)

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1L6J7D9 at UniProt or InterPro

Protein Sequence (235 amino acids)

>Ga0059261_2293 cell division ATP-binding protein FtsE (Sphingomonas koreensis DSMZ 15582)
MANIVQFENVGLRYGTGAETLSDVSFTLSAGSFYFVTGASGAGKTSLLRLLYLAQRPTRG
IVRLFGEDAGALPRKRLPGFRRRIGVVFQDFRLLPHLSAYDNVALPLRVAGIPEADIEGP
VREMIAWVGLKDRDSAKPPTLSGGEQQRIAIARAVITRPEILIADEPTGNVDPDMAERLL
HLFDSLNRLGTTVVVATHDFQLISRIPDARMMRIEKGRLNDPTGALRYPPGQAPA