Protein Info for Ga0059261_1974 in Sphingomonas koreensis DSMZ 15582

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 301 transmembrane" amino acids 21 to 43 (23 residues), see Phobius details amino acids 63 to 83 (21 residues), see Phobius details amino acids 109 to 138 (30 residues), see Phobius details amino acids 145 to 172 (28 residues), see Phobius details amino acids 196 to 219 (24 residues), see Phobius details amino acids 255 to 277 (23 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2M8WCQ2 at UniProt or InterPro

Protein Sequence (301 amino acids)

>Ga0059261_1974 hypothetical protein (Sphingomonas koreensis DSMZ 15582)
MISVGRILEGAFGVFREHFTAVTIWGGIYLAGNLALLLVMQPIMQGALAPGAQADPAQMM
SAMGPVWLLGFLMGIVGVVLYTASMRSVLRPDAGGIAFLRLGLDELRMLGLLMLFIIGGS
VLFGLASTVMALFIGGIAASIESAMFTGIMSVLVVLAVFVIVLFFVVRFSLAFPLTLHRG
AFAIGEAWRLSRGHFWKLFAAALVVAVIGFVASIAINMISAGSHFAEVLAAVSDPSDDGT
RVRILEQRAATLGSFNMMMILQSIGGSAVAAIWIALSGGSAATAARLLVADEFNDAEEVF
G