Protein Info for Ga0059261_1901 in Sphingomonas koreensis DSMZ 15582

Annotation: Sugar phosphate permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 423 transmembrane" amino acids 6 to 23 (18 residues), see Phobius details amino acids 45 to 63 (19 residues), see Phobius details amino acids 74 to 93 (20 residues), see Phobius details amino acids 136 to 158 (23 residues), see Phobius details amino acids 164 to 183 (20 residues), see Phobius details amino acids 230 to 253 (24 residues), see Phobius details amino acids 268 to 289 (22 residues), see Phobius details amino acids 304 to 321 (18 residues), see Phobius details amino acids 327 to 347 (21 residues), see Phobius details amino acids 356 to 382 (27 residues), see Phobius details amino acids 389 to 411 (23 residues), see Phobius details PF07690: MFS_1" amino acids 14 to 340 (327 residues), 161.9 bits, see alignment E=1e-51

Best Hits

KEGG orthology group: K08191, MFS transporter, ACS family, hexuronate transporter (inferred from 66% identity to bsb:Bresu_2895)

Predicted SEED Role

"Predicted mannuronate transporter"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2M8WCG2 at UniProt or InterPro

Protein Sequence (423 amino acids)

>Ga0059261_1901 Sugar phosphate permease (Sphingomonas koreensis DSMZ 15582)
MKSGFRWWIISLIAVATVINYIDRNALAVMWPAVAKDIGAGKEDYALLVTIFMVFYALGQ
SLFGKIFDVVGTRMGFAISIIVWSLSIAAHSMVRSMAMLGVLRGTLGISEAGNWPGAAKA
NATWFPRSERAFAQGIFNAGASLGAIVSAPLVAILFGLVGWRTAFLIVGVLGFLWLLPWI
WVYKSDPDAHPWLSKAERDHILGANERVDGDARPAGYAPSMGQLLRHKQAWAVMAGRFFL
DPIWWLFVSWLPIYLNESFGFDVKQIGMFAWVPFVGAMLGSLSGGWLSGKLIQRGWSADK
ARKLAITLGCVIMLPALLLTATASTPLYAVLLIAAILFGFQVAINNIQTLPSDWFGGGAV
GSLAGISGTAAVAGTLVTTWLVPVMTKTSFAPIFILGAALVPLSLLCIWLGGRIEPVQPK
TEN