Protein Info for Ga0059261_1663 in Sphingomonas koreensis DSMZ 15582

Annotation: N-acyl-D-aspartate/D-glutamate deacylase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 585 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details PF07969: Amidohydro_3" amino acids 83 to 549 (467 residues), 57.3 bits, see alignment E=2.2e-19

Best Hits

KEGG orthology group: K06015, N-acyl-D-amino-acid deacylase [EC: 3.5.1.81] (inferred from 66% identity to sal:Sala_1467)

Predicted SEED Role

"N-acyl-D-amino-acid deacylase precursor (EC 3.5.1.81)" (EC 3.5.1.81)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.5.1.81

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2M8WBS8 at UniProt or InterPro

Protein Sequence (585 amino acids)

>Ga0059261_1663 N-acyl-D-aspartate/D-glutamate deacylase (Sphingomonas koreensis DSMZ 15582)
MRKAFGLACIALAVLAGIPVTATPVPAPAANAPRQSAPAYDIVLRGGTIYDGSGKPGVKG
DVAIRGERIVYVGPRAPGKAKTVIDATGMAVAPGFINMLSWGIESLIADGRGLSELKQGV
TLQVFGEGESMGPLNPAMKADMVRRQSDLRYNVEWTSLGEYLDWLAKRGVSQNVASYVGA
ATVRIHVLGEGDVDPDATQLARMRALVAAEMRQGALGVGSSLIYAPASYAETPELIALVD
EAARCDGGYISHMRSEGDRLLEAIDELIGIARATGARAEIYHFKQAGRDNWHKIDAAIAR
VEAARRAGLRITADMYPYDIAGTGLDAAMPTWVQSGGLEAWIEQLRKPEVRARVIAEMKA
PGVGWENMYRAAGGASGMIAVGFKNEKLKPLSGKTIAEIAAMRGTSPEDTIIDLVIEDGS
RVGTLYRLMNENNVARATSLPWMSFGSDAGAQAPEGAFLKSRPHPRAYGSFARVLGKYSR
DEKRLSLAEAVRRMSALPAANLALRERGSLKPGYYADVVVFDPRTIADRATVENPWALAT
GMRDVFVNGTAALRGGEATKARPGQVVRGPGWTGWPGGGACKPGN