Protein Info for Psest_0974 in Pseudomonas stutzeri RCH2

Annotation: phosphoglucosamine mutase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 445 PF02878: PGM_PMM_I" amino acids 3 to 134 (132 residues), 153.3 bits, see alignment E=6.6e-49 TIGR01455: phosphoglucosamine mutase" amino acids 6 to 441 (436 residues), 628.8 bits, see alignment E=2.2e-193 PF02879: PGM_PMM_II" amino acids 156 to 253 (98 residues), 69.7 bits, see alignment E=5.6e-23 PF02880: PGM_PMM_III" amino acids 257 to 360 (104 residues), 111.1 bits, see alignment E=6.7e-36 PF00408: PGM_PMM_IV" amino acids 372 to 438 (67 residues), 56.8 bits, see alignment E=3.7e-19

Best Hits

Swiss-Prot: 97% identical to GLMM_PSEU5: Phosphoglucosamine mutase (glmM) from Pseudomonas stutzeri (strain A1501)

KEGG orthology group: K03431, phosphoglucosamine mutase [EC: 5.4.2.10] (inferred from 97% identity to psa:PST_3317)

MetaCyc: 65% identical to phosphoglucosamine mutase (Escherichia coli K-12 substr. MG1655)
Phosphoglucosamine mutase. [EC: 5.4.2.10]

Predicted SEED Role

"Phosphoglucosamine mutase (EC 5.4.2.10)" in subsystem Sialic Acid Metabolism or UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis (EC 5.4.2.10)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 5.4.2.10

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GIE9 at UniProt or InterPro

Protein Sequence (445 amino acids)

>Psest_0974 phosphoglucosamine mutase (Pseudomonas stutzeri RCH2)
MTRKYFGTDGIRGHVGQAPITPDFMLKLGWAAGMAFRKQGKCRILIGKDTRISGYMFESA
LQAGLSAAGADVLLLGPMPTPAVAYLTRTFHAEAGIVISASHNPHHDNGIKFFSGRGTKL
PDEVELMIEELIDAPMTVVESAQLGKASRINDAAGRYIEFCKSSVPTSTDFSGLKLVIDC
AHGATYKVAPSVFRELGAEVVVIGAQPDGLNINADVGSTHVGQLQKAVVDHGADLGIAFD
GDGDRVMMVDHTGAVVDGDELLYIIATDLQERDRLSGGVVGTLMSNLGLELALKARDIPF
TRAKVGDRYVIAEMLDRSWVLGGENSGHIVCAQHTTTGDAIIAALQVVLALRRRGQTLAQ
ERLAWHKCPQVLINVRFSGDRDPISHPSVQAACDSVTERMAGRGRVLLRKSGTEPLVRVM
VEGDDETQVRGMAEELAKIVTEVCA