Protein Info for Psest_0970 in Pseudomonas stutzeri RCH2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 143 transmembrane" amino acids 21 to 41 (21 residues), see Phobius details amino acids 61 to 82 (22 residues), see Phobius details amino acids 93 to 111 (19 residues), see Phobius details amino acids 117 to 135 (19 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 83% identity to psa:PST_3321)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GFP5 at UniProt or InterPro

Protein Sequence (143 amino acids)

>Psest_0970 hypothetical protein (Pseudomonas stutzeri RCH2)
MSRSVISDRQPARAGIITWQLAQTFWVGGLWLLQFMVLPALGRIGLAPLLVEEIAGSLKP
LLVGFAAFCSALQALVLVQVTGLRGLWRDVRGQLLLAVGLLAGSQLLMRAGWFESLYWAS
FSYLVMALCGLMLVLQPAPGREH