Protein Info for Psest_0094 in Pseudomonas stutzeri RCH2

Annotation: Uncharacterized enzyme of phosphonate metabolism

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 369 PF05861: PhnI" amino acids 1 to 350 (350 residues), 538.1 bits, see alignment E=4e-166

Best Hits

KEGG orthology group: K06164, PhnI protein (inferred from 84% identity to pfs:PFLU1783)

Predicted SEED Role

"PhnI protein" in subsystem Alkylphosphonate utilization

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GG19 at UniProt or InterPro

Protein Sequence (369 amino acids)

>Psest_0094 Uncharacterized enzyme of phosphonate metabolism (Pseudomonas stutzeri RCH2)
MYVAVKGGEQAIDNAHALLAKKRRGDTGIAELGVEQIRQQLPLAVARVMSEGSLYDEELA
ALAIKQAAGDLVEAIFLLRAYRTTLPRFAESLPLDTGAMQLSRRISATFKDVPGGQLLGP
TFDYTHRLLDFALLAEGERPGPQVDASATLSNCPRVLGLLGEEGLMTPEIDRGEPVPDLT
REPLELPCSRAERLQALARGDEGFLLALGYSTQRGYGRNHPFAGEIRIGTAEVWIEPQEL
GFPVCLGEIELTECEMVNQFVGESAAQAQFTRGYGLAFGYAERKAMGMALVDRALRAGEY
GEEVQGPAQQEEFVLMHCDNVEAAGFVSHLKLPHYVDFQSELELIRKLRQPQAEQTESLA
ETPAKEKRA