Protein Info for HP15_720 in Marinobacter adhaerens HP15

Annotation: succinylglutamate desuccinylase/aspartoacylase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 354 PF24827: AstE_AspA_cat" amino acids 47 to 225 (179 residues), 110.8 bits, see alignment E=3.1e-36

Best Hits

KEGG orthology group: K06987, (no description) (inferred from 92% identity to maq:Maqu_2352)

Predicted SEED Role

"FIG003737: Predicted deacylase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PQE1 at UniProt or InterPro

Protein Sequence (354 amino acids)

>HP15_720 succinylglutamate desuccinylase/aspartoacylase family protein (Marinobacter adhaerens HP15)
MARAPYEIAGTQVKAGTRQTVEVPVAKLYTHTPLHIPVEVVHGRRSGPVLMVCGAIHGDE
INGVEIVRRVLTNSALRHLRGTLVAVPIVNIFGFVQRTRYLPDRRDLNRCFPGSESGSLG
GRIAYLLRTQIMERVTHIIDLHTGAVHRFNLPQIRAELKNPETVRMAEAFGAPIIINSGL
REGSLRAYADSQDIPVITFEGGEALRFDDVVIGSGVKGVIRVMRELEMIPAKKGPKAPRK
RSETAANSQWVRADIDGIMRPVARLGQKVRKGQRLAMVADPFGESETAVVSPCSGIVICV
NNLPLVNEGEAIYHVARFDELSEAEKAMDYFRSSYEGDVGDDVVPVHPWDDRQK