Protein Info for Psest_0645 in Pseudomonas stutzeri RCH2

Annotation: Siderophore synthetase component

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 602 PF04183: IucA_IucC" amino acids 148 to 397 (250 residues), 276.2 bits, see alignment E=2.5e-86 PF06276: FhuF" amino acids 419 to 576 (158 residues), 154.9 bits, see alignment E=2.7e-49

Best Hits

KEGG orthology group: None (inferred from 92% identity to psa:PST_3702)

MetaCyc: 57% identical to alcaligin synthetase (Bordetella bronchiseptica)
6.3.2.-; RXN-11012

Predicted SEED Role

"Siderophore synthetase component, ligase"

MetaCyc Pathways

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GES4 at UniProt or InterPro

Protein Sequence (602 amino acids)

>Psest_0645 Siderophore synthetase component (Pseudomonas stutzeri RCH2)
MNQLVQLPTAAGDLATEHLQAEHWARANRLLVKKALAEFSHEKLLSPEPLGDSHYRVAVP
DSSTEYRFKARRLALDHWSIVTDSIEKLGDGQPQPLDALSFIIEFADTLGISENNLPVYL
DEISSTLFGSAYKLANSPLSAAQLALADFQQIETGMREGHPGFVANNGRMGFDAQDYRAY
APEAASPVRLVWLAVHRSRASYSAIDGLDQPTLLREELGGQLDVFHNQLHALQLAPDDYL
LMPAHPWQWHNILAIGFAAEIANRQIVYLGLSNDRYLAQQSIRTFFNQSQPQRRYVKTAL
SILNMGFMRGLSPYYMQATPAINTYLAERVASDPLLRDCGFQLLREVAAIGYRNPYYEQA
LPASSPYRKMLSALWRESPYGHIQSGQRLMTMAALLHSDGEERALLATLISASGLTADRW
VRRYLDAYLTPLLHCFYAHDLVFMPHGENLILVLEDHVPVRVLMKDIGEEAVILDADAQI
PEAVGRLAVSVPDELKVLSIFTDVFDGFFRYLGQILDEQVGLPEQRFWQQVADCIADYQA
CQPQLRDKFARYDLFAEEFARSCLNRLQLGNNRQMLDLADPAGALKFAGTLKNPVAPYAP
ER