Protein Info for Psest_0562 in Pseudomonas stutzeri RCH2

Annotation: magnesium-translocating P-type ATPase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1182 transmembrane" amino acids 17 to 39 (23 residues), see Phobius details amino acids 55 to 75 (21 residues), see Phobius details amino acids 103 to 120 (18 residues), see Phobius details amino acids 132 to 158 (27 residues), see Phobius details amino acids 164 to 189 (26 residues), see Phobius details amino acids 208 to 220 (13 residues), see Phobius details amino acids 223 to 226 (4 residues), see Phobius details amino acids 230 to 251 (22 residues), see Phobius details amino acids 256 to 323 (68 residues), see Phobius details amino acids 394 to 412 (19 residues), see Phobius details amino acids 418 to 437 (20 residues), see Phobius details amino acids 580 to 599 (20 residues), see Phobius details amino acids 607 to 630 (24 residues), see Phobius details amino acids 984 to 1009 (26 residues), see Phobius details amino acids 1012 to 1013 (2 residues), see Phobius details amino acids 1015 to 1032 (18 residues), see Phobius details amino acids 1054 to 1077 (24 residues), see Phobius details amino acids 1083 to 1104 (22 residues), see Phobius details amino acids 1116 to 1135 (20 residues), see Phobius details amino acids 1142 to 1143 (2 residues), see Phobius details amino acids 1145 to 1164 (20 residues), see Phobius details PF03706: LPG_synthase_TM" amino acids 22 to 320 (299 residues), 118.9 bits, see alignment E=9.5e-38 TIGR01524: magnesium-translocating P-type ATPase" amino acids 350 to 1172 (823 residues), 758.2 bits, see alignment E=1.5e-231 PF00122: E1-E2_ATPase" amino acids 451 to 639 (189 residues), 142.6 bits, see alignment E=3.1e-45 PF00702: Hydrolase" amino acids 656 to 939 (284 residues), 58.7 bits, see alignment E=3.3e-19 TIGR01494: HAD ATPase, P-type, family IC" amino acids 891 to 1012 (122 residues), 99.6 bits, see alignment E=2.2e-32 PF00689: Cation_ATPase_C" amino acids 1008 to 1169 (162 residues), 81.4 bits, see alignment E=2.2e-26

Best Hits

KEGG orthology group: K01531, Mg2+-importing ATPase [EC: 3.6.3.2] (inferred from 85% identity to psa:PST_3725)

Predicted SEED Role

"Mg(2+) transport ATPase, P-type (EC 3.6.3.2)" (EC 3.6.3.2)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.6.3.2

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GIN0 at UniProt or InterPro

Protein Sequence (1182 amino acids)

>Psest_0562 magnesium-translocating P-type ATPase (Pseudomonas stutzeri RCH2)
MHDVLGSTSSSAHARQLVWFSWLLGAAVLGALVAGVLQLSDASHFELLLSQAEPGWLLLA
IALQGLTYIAQGQLYRIVLKASGAALPLWDATKLSLAKLFVDQALPSSGFSGAVTVVALL
QRRGIGLSQVSSCFIISVSAYFAAYLLALGAALVIAIGSGHGGLAVIATSAAFMLFCGLM
AVAAPLIAGLPQSRLASRMQNVRWMQRLLAMVFAAEPRLTRSPALLVRATGYSLAIVLLD
ALTMWVLLYAIGHAAPFAGIFASFMLASVLRSIGIVPGGLGAFEAAAVTTLSWAGVPLAA
GLSATLLFRALSFWLPMLPGFWLSRSALRSQSEGSRETPSMAFWSEPLDQLYGRLQAAPG
GLRSDEAAARQPSVLRAHRPHLAGMVVASLGRQLSSPLVLILLIGAAVALVVHDWLDALI
VLAIVLASALVGCAHEVRSNRAIDRLRGQVASRADVWRDGRIQSIPASDVVPGDIVELSA
GSLIPADGRLVDARDCFVNQALLTGETFPVHKEAGQVAPDAGLAQRDNCLFRGTSLRSGT
ARLLAVNCGVQTELGHIERSLVLRPPETEFKRGLRHFGGLLLRVMLVMVTAVLGLNLFLE
RPPLETLMFAIALAVGLSPELLPAILSATLSAGARRMAARGVIVRHLNAIENLGAMDTLC
TDKTGTLTRGVVALDGALDVDGQPSRTVLRLAWLNASLQTGLRNPLDEAIGDYARDQEPA
MPGAEKLDEIPYDFVRKRLSVLLREADQPTPRLICKGALDNVLHVSASVQQGDALLPLTA
ARREALNARFAAWSAAGYRVLGIAYRFLDHDGCSAEDEQELTFAGFLLFFDPPEPGVREE
LSALHELGVTVKVITGDNRLVARHVAESVGIPVEQIITGAELGQMRDEALINLAPRISLF
AEVDPNQKERIIRALQKTGHVVGFLGDGINDAPALHTADVGISVDNAVDVAKEAADFVLL
RHELGLVREGIDEGRRTFANTLKYIFLTTSANFGNMISMAVASFFLPFLPLLAKQILLNN
FLSDIPAIGIASDRVDADWSRTPHRWDIGEVRRFMITFGLISSAFDLLTFGVLLYLVGEQ
PELFRSGWFVESLITELAIIFVVRTHKPFYRSRPGRFLLASAIGVGLLAVLLPYTPVGAW
FALQPLPAAVLGAVLLITLLYAACSEWAKQRFFARLSAARQP