Protein Info for Psest_0559 in Pseudomonas stutzeri RCH2

Annotation: Sortase and related acyltransferases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 187 PF13302: Acetyltransf_3" amino acids 21 to 155 (135 residues), 45.3 bits, see alignment E=4.3e-15 PF13420: Acetyltransf_4" amino acids 21 to 176 (156 residues), 58.7 bits, see alignment E=2.2e-19 PF00583: Acetyltransf_1" amino acids 35 to 155 (121 residues), 73.1 bits, see alignment E=7.2e-24 PF13673: Acetyltransf_10" amino acids 63 to 164 (102 residues), 36.4 bits, see alignment E=1.4e-12 PF13508: Acetyltransf_7" amino acids 70 to 156 (87 residues), 47.7 bits, see alignment E=5e-16 PF08445: FR47" amino acids 103 to 158 (56 residues), 35.5 bits, see alignment E=2.4e-12

Best Hits

Swiss-Prot: 61% identical to MNAT_ECOLI: L-amino acid N-acyltransferase MnaT (mnaT) from Escherichia coli (strain K12)

KEGG orthology group: K03823, phosphinothricin acetyltransferase [EC: 2.3.1.183] (inferred from 65% identity to pfo:Pfl01_0583)

MetaCyc: 61% identical to L-amino acid N-acyltransferase (Escherichia coli K-12 substr. MG1655)
Amino-acid N-acetyltransferase. [EC: 2.3.1.1]

Predicted SEED Role

"GCN5-related N-acetyltransferase"

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.3.1.1

Use Curated BLAST to search for 2.3.1.1 or 2.3.1.183

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GGN0 at UniProt or InterPro

Protein Sequence (187 amino acids)

>Psest_0559 Sortase and related acyltransferases (Pseudomonas stutzeri RCH2)
MSVNVYCEDPRPALKELNVQIRDALDADLEGILHIYNDAVLNSTAIWNDHTVDLDNRRAW
LAERHAQHYPVLVAIDEQGRVAGYASFGPWRPHDGFRHTVENSVYVSPDHRGSGIGRSLM
KALIERARVLEKHVMVAFIESENRASVHMHQQLGFIHVGQMRQVGCKFGRWLDLTMMQLT
LNRTSNP