Protein Info for PGA1_c05470 in Phaeobacter inhibens DSM 17395

Annotation: hydroxyisourate hydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 123 TIGR02962: hydroxyisourate hydrolase" amino acids 9 to 123 (115 residues), 129.9 bits, see alignment E=2.8e-42 PF00576: Transthyretin" amino acids 10 to 122 (113 residues), 129 bits, see alignment E=5.8e-42

Best Hits

Swiss-Prot: 62% identical to HIUH_RHILO: 5-hydroxyisourate hydrolase (mlr5133) from Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099)

KEGG orthology group: K07127, 5-hydroxyisourate hydrolase [EC: 3.5.2.17] (inferred from 72% identity to sil:SPO0871)

Predicted SEED Role

No annotation

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.5.2.17

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See I7DXX7 at UniProt or InterPro

Protein Sequence (123 amino acids)

>PGA1_c05470 hydroxyisourate hydrolase (Phaeobacter inhibens DSM 17395)
MTTRTEPGYLTTHVLDTARGCPAAGLPIRLYRLDGRGRTELASMLTNADGRTDSPILPKK
DFVTGNYELVFEAGEYLRASGQASGEVLFLDDVPIRFGITDDSAHYHVPLLLSPFGYSTY
RGS