Protein Info for Psest_0502 in Pseudomonas stutzeri RCH2

Annotation: Uncharacterized protein conserved in bacteria

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 557 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details PF02493: MORN" amino acids 58 to 80 (23 residues), 17.8 bits, see alignment (E = 2.5e-07) amino acids 81 to 102 (22 residues), 21.8 bits, see alignment (E = 1.3e-08) amino acids 104 to 124 (21 residues), 22.4 bits, see alignment (E = 8.4e-09) amino acids 126 to 146 (21 residues), 25.2 bits, see alignment (E = 1.1e-09) amino acids 150 to 169 (20 residues), 16.3 bits, see alignment (E = 7.2e-07) amino acids 194 to 215 (22 residues), 19.1 bits, see alignment (E = 9.2e-08) amino acids 240 to 261 (22 residues), 7.8 bits, see alignment (E = 0.00037) amino acids 263 to 284 (22 residues), 14.3 bits, see alignment (E = 3.3e-06) PF01650: Peptidase_C13" amino acids 400 to 541 (142 residues), 101.1 bits, see alignment E=7.9e-33

Best Hits

KEGG orthology group: None (inferred from 85% identity to psa:PST_3791)

Predicted SEED Role

"MORN repeat family protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GIH5 at UniProt or InterPro

Protein Sequence (557 amino acids)

>Psest_0502 Uncharacterized protein conserved in bacteria (Pseudomonas stutzeri RCH2)
MLRFLPFVLLTLLTACGEGEPLTPANAVLPDGGRYRGDIVDGRLQGGGRIDYPNGSYYLG
QFKDGQWHGLGTWHGATGDRYEGEFKHGLFDGLGRFSYAEGGVYEGEFQDGRMHGHGRFS
QDGTVYEGEFRDNLYHGQGSLEYADGFSHHGQFRKGQPDGPGTRKDADGQLSGHFSAGSL
NGEGSFVTTQGQRYSGQFENDQFHGQGHYEDSAGNVWSGTFVQGELSGTGTHVADDGSRY
SGQFRSWRYHGQGRLDRSDGSFYTGGFRLGRFHGDGVLTQADGSELRGIWRNDRRIRDEQ
GRALPDPLELALLNQGTLLGQAIEALPPSSPAQELYTLTVAGDGRQSVFMREADYVQRLL
AERYAAHGQLSLVNHRDHLADRPLATRENLARAIRALAERSGEEDLIFLYLTSHGSADHE
LVLSQPRLSLDDLPAADLAQLLAPLAGRKTILVVSACYSGGFIEPLKNDHTLIMTAARAD
RVSFGCSEQSDFTYFGRALFAEALLETDDIVQAFTLAAAKVAEREQADDYQASEPQLWAP
KPVVQRWQELRQQRATQ