Protein Info for PGA1_c04740 in Phaeobacter inhibens DSM 17395

Annotation: phoH-like protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 335 PF02562: PhoH" amino acids 126 to 329 (204 residues), 302.7 bits, see alignment E=1.8e-94 PF13604: AAA_30" amino acids 131 to 282 (152 residues), 35.5 bits, see alignment E=1.3e-12 PF13245: AAA_19" amino acids 133 to 282 (150 residues), 30.2 bits, see alignment E=6.6e-11

Best Hits

KEGG orthology group: K06217, phosphate starvation-inducible protein PhoH and related proteins (inferred from 82% identity to sil:SPOA0006)

Predicted SEED Role

"Phosphate starvation-inducible protein PhoH, predicted ATPase" in subsystem Phosphate metabolism

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See I7EJ78 at UniProt or InterPro

Protein Sequence (335 amino acids)

>PGA1_c04740 phoH-like protein (Phaeobacter inhibens DSM 17395)
MAIGTLTPSQEQDASHEALLEFPDNRLLIDLCGEYDRNLATLEQKLGVQIVRRGNQLSVL
GEEAARDQAAAVLAALYDRLETGRSVEAGDIDRELRMGQEQVATPGSQLEMFRGGKVEIK
TRKKLVEPRTDAQKAYVQSLFEHELAFGIGPAGTGKTYLAVAVGVSMFITGHVDKIILSR
PAVEAGEKLGYLPGDMKDKVDPYMQPLYDALNDFLPGKQLAKLLEEKQIEIAPLAFMRGR
TLSNAFVVLDEAQNATTMQMKMFLTRLGEGSRMVITGDRSQVDLPRGVASGLADAERLLS
SIPKVSFNYFTSRDVVRHPLVAAIIEAYEADEKPA