Protein Info for HP15_p187g166 in Marinobacter adhaerens HP15

Annotation: parB-like partition protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 395 PF02195: ParB_N" amino acids 101 to 200 (100 residues), 29.3 bits, see alignment E=4.1e-11

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PSC8 at UniProt or InterPro

Protein Sequence (395 amino acids)

>HP15_p187g166 parB-like partition protein (Marinobacter adhaerens HP15)
MTQASDSTSKRSPRKRARASTGNEVLKKTFGKTEESVTPLSGSELPADEVVPGTPIRSAT
SRTDKVEPKQVPESTRNMVEAVSAKSSDGDALRQYQCTTNYYIPANKIRDWKYNDRSQEA
VLSDPKFPELKDSIELAGRLAEAIVVRPLSSVDEDGFEFEQVIGCKRLTACKLISPNFPV
ECSVQALTDAEAAALQAAENKGRSDPPIWDRGCAWASLLDQKVYGSVRELALALGEKHEK
TVANYVRFARYIQAEPEFRTLPLSRLAQAPLELLANIAKGKDVPVEERDELVQRIVEIED
DLRARPERATKLLEKAIVKFKAEKSNSGFDNRSVEKPRVFQSEYGKTLTLTRKNGELRMV
LHADVASEVDHDELEGIVVSYLREKGLHMKEKAGK