Protein Info for Psest_0438 in Pseudomonas stutzeri RCH2
Annotation: NACHT domain.
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
KEGG orthology group: None (inferred from 74% identity to rme:Rmet_6257)Predicted SEED Role
No annotation
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See L0GI29 at UniProt or InterPro
Protein Sequence (1473 amino acids)
>Psest_0438 NACHT domain. (Pseudomonas stutzeri RCH2) MSEDIKNTAITAAGYIYQNRQGLRVLCDWLDAPARYTRVRFECDDEAVAPTGLDDIVVER ADSLLDLQQVKFTPDPNAHPLCWDWMLEKTGKTARSRSMLRKWFDAFKALEPARTGLFSL TTNRRPDADIEACLSGGKISFARIPEPRRSEVIAELGGEQDCEAFFSQLHIFHSDKGFDT LEQEVDARLRKHGTPEGIANLKYVALNWATRKNFPPPDGWITLEQVRTILRSTPAAPLPE DFVVPLGYEVPDETFHSEFARDTVNATGGAIVLTGPPGRGKSTYLSALCDTLAERGIPTV RHHYFLSTTERGRDRVNSYVVEQSIEAQVKRFHPDVQVPVGDLRSLLEACASHYKQLAKP FVLVLDGLDHVWRINAEDKRPLDDVFAQVIPCPDNMVLLVGTQPVDDVQLPTDLLAVAPK AEWRTLPAMSENAVLSYLRKAFQEGRFTTGFEGEDGVERQLQETATALRTQTNGHPLHVI YAVAELEHTSRSLSRWDVEQLKGDLSREAQFYYASLWQSLPPSLKDTLRLVCAFSFFWPR SAFGEIATKVGTAEPEVAKVEHLLHSSAAGLKVFHESLAVFVRATPGYVDRIEELMPAVA SWLESSAPTSLRVNWLWTVQARLGDPKNLIAGLTRDWIMLRLEEGYPESLFDTLLSDALV AALDTKEFAEAYRLQHLKGRMVGGSRYQMQSDDMARLISFTFFLTTEESVVREALASRHE MDILQLAALGLALRTRGDEIVAEMCGEEALRRFRGLSRFSSRYSSSAGSDEFQFLVDAFA RLGVIGATPTALAQLVSENGAAVWLPRVQILVEEGNLDDLMEVAASLAAGRSKNLISDAC VRAAATAGVSITERDDFSALARTPLVAAVEAACKRVSKPMNEPIPIEWLNGNYYERKEDL ATLAHHWFFSAVHLSLSMAVEGQTAFEFVRAPSYKDKANITDFLNALSAAGAQVAHQWWQ GEFIDFHELFALLQTVEFRRFRQNHDESSAAEDFRSALHRIACDIRVGSILQGHFDDVPL TKETMEAAGQYVWFDSESFRTQYASGLLARMGDDAAAAFVESQRILLDAEICRETSVHLQ TPLQLCSIALAHGLSASARELCKQTWELSTGYAHRKDPTLNNTVDAIGYLVDVAPNDSRR LLGRIAPQVHHVLDYTDGKGTRHVLAAADRLLAKLKPSALVIKYEEHIHAGDWSQAEDSL REYVVQGIEDGWPLDALMRTALHPEIHDVLSKLALEGNSRAAERLGVLREHVGWDIGLLQ RPEYPGSSSESKPYTGDVTDFAPEQLSDLLDSLSASHSEQEKLLRDWYQHWDKAGQGKRL LSALDGLLLSEKGWPSGVLVLSDLAFQTRRKLSGVKAAWKYLVQAHIRNGAWVGFAEKEE KTLSRLDLVVKHYPQRCDEFVAATTYAMFGDPEPPRVAPTEVMVYFYARQNRIAEAVKFA ETMVNCVIEDTRTLPLERPRWAAELVSSEIAEA