Protein Info for Psest_4251 in Pseudomonas stutzeri RCH2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

No protein families (PFam or TIGRFam), signal peptides, or transmembrane helices were found in this protein.

Best Hits

Predicted SEED Role

"EF hand domain protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0GTL2 at UniProt or InterPro

Protein Sequence (946 amino acids)

>Psest_4251 hypothetical protein (Pseudomonas stutzeri RCH2)
MTGRRYKIVESVGNRIEDVFRYEDLAKHHPSLGREPNREYETINGQLEEVRHVGSRTLIK
KDFVLLVEGSNQSIPVPSPLAGYAKINRAYGTLQIYDAPSNGQLLGQILHLHPAFKVNDG
DAITYGQHIGLQAGTDRAGGQSYAIHVHAEFEESVFKRYIADIVDGTLSPDDEKPKAAVS
GSENGAKGDWCYPCKPVEGRSLQPLTALCKAQTGFYPIGGNGLWHGGIHFDRGTSGAFDQ
SRVNCITHGEVVAYRIDDEYPISTYTGKPPLQIQAPFSTGFVLVKHTLQAKASITESDPK
ANPPALAIFSLYMHLKCWKDYRQDEKLERPSFWASGLYTVSTSSGELNVRAEARMNSPVV
GKLSRGAQIRASGEGAFLKLEQVISGNNEPVLTPQVDGSMPGYVSSSFLTAQSKPKALGS
VVLLNPPVPIKAGDLIGHLGKYQNQSDGLPQELLHLEVFSCEDVPSFISESRKWAHNLPA
EKKSLLKVHAGASKLIRHRGDINSENPPKQSDEGSEIGVDLILPQSLLDALPNEAKIRLP
ANNTAYSHSGETIWWRLDDLLADKEGQPISGWLPEQELITTRHSPWEWEGFECLEDADPP
SAGLAYYLNAALRLSDDEKASYQGVVDLADKGPVRSRLYDIIDTNRDGKMTSREIQGALE
KPWHAQSISQLITRHESEWFWNAAHWDELDELMGHRSDDPNQDWAEEKNRIKTLSWWGDI
AGNYSIRADGKAWHFQPLALIGVFSAVAKARPTISEGRITFDAEGNNIPTSPFFSRVVHW
PGNDLSGVTLGRGYDMGSRPEIEIYDHMTSAGIAHDQATKIAQAHGKKGVIAQQFVRENR
ASIGQITPEQEIVLFNIIHPNYVARAIRNYDHWTASEPERTEWNALDQVIRDVLVDFVYQ
GFTKGPNPMKAGMRNDKAELIRYIENTPAIRQYEPGRNRARYLRNN