Protein Info for HP15_37 in Marinobacter adhaerens HP15

Annotation: 3-ketoacyl-(acyl-carrier-protein) reductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 233 signal peptide" amino acids 1 to 25 (25 residues), see Phobius details PF00106: adh_short" amino acids 8 to 194 (187 residues), 135.3 bits, see alignment E=4e-43 PF08659: KR" amino acids 9 to 175 (167 residues), 23.6 bits, see alignment E=8.6e-09 PF01370: Epimerase" amino acids 10 to 170 (161 residues), 38.4 bits, see alignment E=1.9e-13 PF13561: adh_short_C2" amino acids 19 to 229 (211 residues), 118.1 bits, see alignment E=1e-37

Best Hits

KEGG orthology group: None (inferred from 52% identity to gag:Glaag_0381)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PI96 at UniProt or InterPro

Protein Sequence (233 amino acids)

>HP15_37 3-ketoacyl-(acyl-carrier-protein) reductase (Marinobacter adhaerens HP15)
MNRQLDGKTVIVTGAFGVLGRALSSVLKDRGARVAGLDLSACPSDLQAEENFLPIGGVNL
TEESSAKDALASVAEKFQRIDCIVNVAGGFAWETFEQGSLDTWDVQYQMNLRTAVVATHS
ALPYLLSSGNARVVNVSALAALKAGLGVSAYAAAKAGVARFTESLAEELKHRNVTVNAVM
PSIIDTPNNREAMADADFSTWVNPEALAGVISFLLSDEGSVITGACLPVPGRV