Protein Info for HP15_357 in Marinobacter adhaerens HP15

Annotation: peptidase M23B

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 472 signal peptide" amino acids 1 to 38 (38 residues), see Phobius details PF04225: LysM_OapA" amino acids 105 to 172 (68 residues), 26.5 bits, see alignment E=8.1e-10 PF19425: Csd3_N2" amino acids 199 to 317 (119 residues), 49.1 bits, see alignment E=8.2e-17 PF01551: Peptidase_M23" amino acids 330 to 425 (96 residues), 118.3 bits, see alignment E=2.1e-38

Best Hits

KEGG orthology group: None (inferred from 81% identity to maq:Maqu_0696)

Predicted SEED Role

"Peptidase, M23/M37 family"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PLW5 at UniProt or InterPro

Protein Sequence (472 amino acids)

>HP15_357 peptidase M23B (Marinobacter adhaerens HP15)
MRYVLKMFPKTHITIAAAATVVVTAAILMSPSSNVEAKRMSYALDLEQGTVSETGAAPEQ
AMPTEAPVADTQPKAPESDVATEATQQASVSAPEQPVAPKLPELEWQTFAIKSGDTLSSL
FKKAGFNDGIMLSVIHGDGEAEKLQRLYAGETIRFATTEEGGLAAIDLQRNRLETLKITK
EGESFTGETEVRKPEARPAFASGTIDGSLYLAAREAGLNDSLTMELAGIFGWDIDFVYDV
RKGDQFEVVYEELYLDGEKFDTGRILSARFVNRGEENLALLYTDSNGDSDYYAPDGKSMR
KAFLRTPINARISSPFNLQRRHPVLDVVRPHEGTDYAAPPGTPIKAAGSGRVKFAGWKGG
YGRTVILQHGDNITTLYAHMSRLGKGIKNGTRVKQGQTIGHVGSSGMVTGPHLHYEFRLN
GSPRNSRTVKLPDAKPIPSSEMARFKQFTEQRIAQFDVFRESYQQLALASDD