Protein Info for HP15_3522 in Marinobacter adhaerens HP15

Annotation: zinc import ATP-binding protein znuC

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 255 PF00005: ABC_tran" amino acids 22 to 148 (127 residues), 92.5 bits, see alignment E=5.9e-30 PF13304: AAA_21" amino acids 117 to 184 (68 residues), 27.2 bits, see alignment E=5.5e-10

Best Hits

Swiss-Prot: 80% identical to ZNUC_MARHV: Zinc import ATP-binding protein ZnuC (znuC) from Marinobacter hydrocarbonoclasticus (strain ATCC 700491 / DSM 11845 / VT8)

KEGG orthology group: K09817, zinc transport system ATP-binding protein [EC: 3.6.3.-] (inferred from 80% identity to maq:Maqu_3776)

Predicted SEED Role

"Zinc ABC transporter, ATP-binding protein ZnuC" in subsystem Transport of Zinc

Isozymes

Compare fitness of predicted isozymes for: 3.6.3.-

Use Curated BLAST to search for 3.6.3.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PG22 at UniProt or InterPro

Protein Sequence (255 amino acids)

>HP15_3522 zinc import ATP-binding protein znuC (Marinobacter adhaerens HP15)
MTDPLVNLENLTVRFDERPVVDQVNLKIHRGDIITIIGPNGAGKTTLIKAVLGIQKVSEG
QVSLKKNLVIGYVPQHLTLEATLPLSVKRFMLLSGRSLSECESALTRTGVGHLLHASVHH
LSGGEKQRLLLARALARKPDLLVLDEPAQGVDINGQASLYDLIRQLRDDLNCGVIMISHD
LHLVMAATDKVICLNQHVCCSGYPEDISHDPAFIETFGRPVAESLAVYHHHHNHSHDLHG
DVVEGRHTECDHAHH