Protein Info for HP15_313 in Marinobacter adhaerens HP15

Annotation: conserved hypothetical protein, secreted

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1075 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details PF13205: Big_5" amino acids 33 to 120 (88 residues), 37.1 bits, see alignment E=2.3e-13 amino acids 521 to 598 (78 residues), 28.1 bits, see alignment 1.4e-10

Best Hits

Predicted SEED Role

"FIG00784532: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PL35 at UniProt or InterPro

Protein Sequence (1075 amino acids)

>HP15_313 conserved hypothetical protein, secreted (Marinobacter adhaerens HP15)
MKYNNTLALIPALLLAACGGDEQTMNEKVSPGSVVYSYPADGQADVSPKADIVLRFSHAL
TDEDADLQNKILLQSQEQSLPFSISRIDGGKSLMLSPSSELDTLGDYTVTFSEPLAAEGG
RQIDTPNAVGDAGIQFETRGSFSGPASITNSAADFDIAWQVPANNSPFEAMNFSTFRLAM
THPIHPDWKALGGSIQLLDGSGGIVPAMVLVKGNRITVDPCLVEDPRNCGSKDDVLDTSQ
TYTLRLENLASLTSPETDRFSEEIAFTPRETGPTVVLQQSAVDSGLAAGIAEQDVTRSVL
NGQVINGVTLNSVLQGEAGPSQQTGDLFAELAYAPAFEADEALPLRIARGSVLNSTSLDV
LVGGEVPVLEAATGQLQTTGNIKVTMLSDASGYLSPNPYTNDINAPRHITLFMDVSMNTE
NAQPNAALSQDLMGVELRGIALVQEGVLTIDAIGMVEPNLLGQEYTDSTIAFHLQAATDA
DSVLDAELLRELDSTSPSLVSWMPGPDNAIPDTRQSMQRPGDPVILFFDEPLAADSIDTG
ISLFADGVPVETLETQLDGTAVILNPGDGLRHGVDYEVVIDGLTDLAGNPATVAPLQFSL
DDIGGSTVTRRPALALTTYPGYPCETDHSLLDLSAGVLGQCYSDGGVGDTLPVSTMPSDR
PITVVFSKSMDLNSIIQGDTFIVEKVRQEPNGSVTVVESNVPGRLEKNLQRIRFYPDQPW
EADAHYRYTLKSSEDAGSCSTGSYTSICDSDGLALKTDLLEGLDDGGGNNGPDDMVIYFT
GTEPLDSVFTPLRNLPVRDTNANFIVDCDSNTNPDCLEPFDHQGSDAEGWAASANSTKLR
VRNNEASASPPVIVASTADARVGCETGERCPKDKFIYQTYALNTEVIGPGVYEPTGDEGI
LVNLYPTQLATTSISVFTELRVFGFIPLQEESITNTQVLRMRYAKDDPACSGPGCSRSSL
IPGVITEGENGQPVFKTRAELMLDAPDMEIPLGGRHDLYGREFVLELEGNITFFDDGRMQ
IEQRNSNLVDINVRARALGVPGGEIVTIDLPLQIPEQGVYLNFISNPVKEIPAEH