Protein Info for HP15_3072 in Marinobacter adhaerens HP15

Annotation: phosphoglucosamine mutase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 447 PF02878: PGM_PMM_I" amino acids 4 to 135 (132 residues), 155.7 bits, see alignment E=1.2e-49 TIGR01455: phosphoglucosamine mutase" amino acids 7 to 443 (437 residues), 631.8 bits, see alignment E=2.8e-194 PF02879: PGM_PMM_II" amino acids 158 to 255 (98 residues), 66.7 bits, see alignment E=4.7e-22 PF02880: PGM_PMM_III" amino acids 259 to 365 (107 residues), 107.2 bits, see alignment E=1.1e-34 PF00408: PGM_PMM_IV" amino acids 374 to 442 (69 residues), 64 bits, see alignment E=2.2e-21

Best Hits

Swiss-Prot: 88% identical to GLMM_MARHV: Phosphoglucosamine mutase (glmM) from Marinobacter hydrocarbonoclasticus (strain ATCC 700491 / DSM 11845 / VT8)

KEGG orthology group: K03431, phosphoglucosamine mutase [EC: 5.4.2.10] (inferred from 88% identity to maq:Maqu_3353)

MetaCyc: 59% identical to phosphoglucosamine mutase (Escherichia coli K-12 substr. MG1655)
Phosphoglucosamine mutase. [EC: 5.4.2.10]

Predicted SEED Role

"Phosphoglucosamine mutase (EC 5.4.2.10)" in subsystem Sialic Acid Metabolism or UDP-N-acetylmuramate from Fructose-6-phosphate Biosynthesis (EC 5.4.2.10)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 5.4.2.10

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E4PP06 at UniProt or InterPro

Protein Sequence (447 amino acids)

>HP15_3072 phosphoglucosamine mutase (Marinobacter adhaerens HP15)
MSERKYFGTDGIRGHVGEFPITPEFMLKLGWAAGQAFKRDGQRNSVLIGKDTRLSGYMFE
SALEAGLAAAGVDVKLLGPMPTPAIAYLTRTFRASAGIVISASHNPHHDNGIKFFSAAGT
KLDDALEAEIERWLDKPIEVCGPTELGKASRVDDAPGRYVEFCKSTVPNEFTLDGMNIVL
DCAHGATYHVAPKVFRELGAKVSVIGGDPDGLNINLNVGSTHLQALKAAVIEKNADLGIA
FDGDGDRVLMVDRDGSEVDGDELLYVIASQRFAEDRLKGGVVGTLMTNLGVELALNEIGI
EFERAKVGDRYVMERLLANNWVLGGEGSGHMVIRDCTSTGDGIVSALQVLLSVWKSGKTL
ADLRKGMSKLPQKMINVRVAQRFDPFSRDDIVAAVRKAETELGSSGRILLRASGTEPLIR
VMAEGQDASEILRVVEELAKVVEKSTA